| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1268 |
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| Symbol | alaS |
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| ID | 5694103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1515314 |
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| End bp | 1517944 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641263862 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001529151 |
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| Protein GI | 158521281 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGGAA ACGAGGCACG AAAAACGTTT CTGGACTATT TTGAAAACCA GGGCCACCGG
GTGGTGCGCA GCTCCTCCCT GGTGCCCCAG GCCGATCCCA CCCTGCTGTT TGTCAATGCC
GGCATGGTGC AGTTCAAACG GGTGTTCATG GGCGAGGAGA AGCGGGACTA CACCACCGCC
ACCACCTCCC AGAAATGCGT CCGGGCCGGG GGCAAGCACA ACGACCTGGA AAATGTGGGA
TACACGGCCC GGCACCACAC CTTTTTCGAG ATGCTGGGTA ATTTTTCGTT CGGCGACTAC
TTCAAGGAGC GGGCCATTGA GCTGGCCTGG GACCTGCTGC TCAACGGCTA CAAACTGCCT
GAAGACAAAT TGTCGGTTTC CGTGTTTCAC GAGGATGATG AGGCCTTTTC CATCTGGAAA
GACAGAATCG GTCTGGCCGA GAGCCGGATC GCCCGGCTGG GGGAGAAGGA CAACTTCTGG
TCCATGGGCG ACACCGGTCC CTGCGGACCG TGCAGTGAAA TCTATATGGA CCGGGGAGAG
AAATACGGCT GCGGCCGGCC CGACTGCGCG CCCGGATGCG ACTGCGACCG GTTCATGGAG
ATCTGGAACA TGGTGTTCAT GCAGTACAAC CGCCAGGCCT CGGGCGAGCT GACGCCGCTG
CCCCATCCGA GCATTGACAC GGGCATGGGC CTGGAGCGGA TCTGCGCGGT GATCCAGGAC
CGGGACACCA ACTACGAGAC TGACCTGTTT ATTCCCATCA TTCGTGGCAT TGAGGCGGCT
TCCGGCAAAA CCTACGGCCA GGCTCCGGAC ATGGATGTGT GCATGAAGGT GATCGCGGAC
CACAGCCGGG CCGCGGCCTT TCTGATCGGC GACGGGGTCC TGCCCTCCAA CGAGGGCAAG
GGCTATGTGC TGCGCCGCAT TCTGCGGCGG GCCATTCGCT ACGGCCGCCA GCTCGGCCTG
ACCCGGCCAT TTCTTTCCCG GACCGCCGGC ACGGTGTTTG AAGTCATGGC CGAGCCTTAC
CCGGAACTCA AAGAGAACGC TTCTTTTATC ACCAACGTGC TTGAAAACGA GGAGGTCCGG
TTTTCTGAGA CCCTGGACAA CGGCCTGCGC CTGCTCTCCG AGACCCTGGA CGGCATGGCG
GCAAAGGGAG AGTCCGTCAT TCCCGGCGGC GTGATCTTCA AGCTGTACGA TACCTACGGG
TTTCCGGTGG ATATTGTGCG GGACGTGGTG CGGGAGAAAA TGATCGGCCT GGACATGGAG
GGGTTTGACG CGGCCATGGC TGAGCAGAAG GCCAAATCCC GGTCAGTAGT CGACTTTTCA
AAGCAGCCAG AGGCCTACCG CAACCTTTCC GCAAAAGGGA TGAAAACCGG TTTCGTGGGC
TATGCCGGCC TGGCCGCCCA AGCCACGGTG CTGGCCCTGG TCAATGGCGG CAGTGAGTTG
GAGACCGCAA CCGCCGGCCA GGAGATTGAA ATCGTGACCG ATACCACGCC TTTTTACGGG
GCGTCCGGTG GCCAGATGGG CGACGTGGGT GTCATCACCG CCGACGGCCT GGAAATAACA
GTGACCGATA CCATCAAGGA CCCTACCGGC CTTGTCATTC ACAAGGGGCA AGTGGCTTCC
GGAACGGTGA AAAAGGGCCA GACCATTAGC CTGGCCGTGG ATGAGGACCG GCGCCGGGCC
ACGGCCGCCA ACCACACGGC CACCCACCTG CTGCACGCGG CCCTGGGCGG GATTGTGGGC
GACCATGTGA AACAGGCCGG CTCCATGGTG TCGCCGGACC GGATGCGGTT TGACTTTACC
CATTTTTCCA TGCTGGACCG GGCCACCCTG GACCGTATCG AGGTGTTTGT CAACGACCGG
ATTCGGGAAA ACCGGGCCGT GACCATCTCC GAGATGAGCA TGGACCAGGC CATGGAACAG
GGGGCTACGG CCCTGTTTGA GGAAAAATAC GGAGACACGG TGCGTGTAGT CGCGGTTGAT
GGGGTGAGCA AGGAATTGTG CGGCGGCACC CATGCCCAAC GGACCGGAGA CATCGGCCTG
TTCAAAATTC TTTCCGAAGC CAGCGTGGCT TCCGGGGTGC GCCGTATCGA AGCCGTGACC
GGGGCCGGGG CTGTGGCCTT TGTTCAGGAA CAGATGGGCA TCCTTGCCGA AGCGGCCGGC
ATGCTTAAAG AGTCGCCGGC AGCTCTTGCG GCCCGCATTC AGAAGCTGCT GGCCGAGTCC
AGGACCATGG CAAAAGAGAT TGCCGGATTA AAGACTTCCC TTGCCACCGC CTCCATGGAG
GGGCCGAAAA GCGACGACGC CAAAACCCTT AACGGGGTAA AGGTGATCGC CCGCACGGTG
ACGGCGGACA ACCCGGCGGC CCTGCGGGAT CTGGCCGACC GGCTCAAGGA CAAGCTGGGC
TCCGGCGTGG TGGTGCTGGG GGCAGCTGCC GACGGCAAGG CGTTTCTGAT CGTGTCGGTG
TCCAGGGATT TGACCGGCCG GTTCAAGGCC GGCGATATTG TGCGCGAGGC AGCGGCTGTT
GTGGGCGGCA AGGGCGGTGG CCGGCCCGAT ATGGCCCAGG CCGGGGGCCC CCAGCCGGAG
CACCTGGAGG CCGCCATTCA GAAGGCCTGC GACATGATTG GAAAAGGTTG A
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| Protein sequence | MTGNEARKTF LDYFENQGHR VVRSSSLVPQ ADPTLLFVNA GMVQFKRVFM GEEKRDYTTA
TTSQKCVRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKERAIELAW DLLLNGYKLP
EDKLSVSVFH EDDEAFSIWK DRIGLAESRI ARLGEKDNFW SMGDTGPCGP CSEIYMDRGE
KYGCGRPDCA PGCDCDRFME IWNMVFMQYN RQASGELTPL PHPSIDTGMG LERICAVIQD
RDTNYETDLF IPIIRGIEAA SGKTYGQAPD MDVCMKVIAD HSRAAAFLIG DGVLPSNEGK
GYVLRRILRR AIRYGRQLGL TRPFLSRTAG TVFEVMAEPY PELKENASFI TNVLENEEVR
FSETLDNGLR LLSETLDGMA AKGESVIPGG VIFKLYDTYG FPVDIVRDVV REKMIGLDME
GFDAAMAEQK AKSRSVVDFS KQPEAYRNLS AKGMKTGFVG YAGLAAQATV LALVNGGSEL
ETATAGQEIE IVTDTTPFYG ASGGQMGDVG VITADGLEIT VTDTIKDPTG LVIHKGQVAS
GTVKKGQTIS LAVDEDRRRA TAANHTATHL LHAALGGIVG DHVKQAGSMV SPDRMRFDFT
HFSMLDRATL DRIEVFVNDR IRENRAVTIS EMSMDQAMEQ GATALFEEKY GDTVRVVAVD
GVSKELCGGT HAQRTGDIGL FKILSEASVA SGVRRIEAVT GAGAVAFVQE QMGILAEAAG
MLKESPAALA ARIQKLLAES RTMAKEIAGL KTSLATASME GPKSDDAKTL NGVKVIARTV
TADNPAALRD LADRLKDKLG SGVVVLGAAA DGKAFLIVSV SRDLTGRFKA GDIVREAAAV
VGGKGGGRPD MAQAGGPQPE HLEAAIQKAC DMIGKG
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