Gene Dole_1247 details

Gene Information

• Locus tag: Dole_1247
• ID: 5694081
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1489484
• End bp: 1491439
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 641263840
• Product: acetoacetyl-CoA synthase
• Protein accession: YP_001529130
• Protein GI: 158521260
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR01217] acetoacetyl-CoA synthase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.916706
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAGAC TGTTATGGCA GCCCTCCCCG GAAAGGGTGC GGGGCTCCAA CATGTACCGG 
TTCATGGAGA AGGTGAACCA GGCCCACGGC ACCCGGTTCC AGGGTTACGA TGACCTGTAT 
CGCTGGTCGG TGGACCATAT TCCCGACTTC TGGGCCCGTG TGTGGGATTT TACAGGCATC 
CGCTCTTCAG CGCCGTATAC CGAAGTGGTG GATGATCCGC TAAAAATGCC GGGGGCAAAG 
TGGTTTTCCG GGGCCCGTCT CAATTTTGCC GAAAACCTGC TGCGCCACCG GGATGATCAC 
ACGGCCCTGG TTTTTTGCAG CGAGGGGGAG CGGCACCGCC TGCTGACATA CGCGCAGCTT 
TATGCCGGTG TGGCAAAAAC CGCGGCAGCC CTCAAAGCCC TTGGCATTGC CCCCGGCGAC 
CGGGTAGCCG GGTTTATGCC CAACATGCCC GAGGCGGTCA TTGCCATGCT GGCCGCTGCC 
AGCCTGGGCG CGGTGTGGTC CTCCTGTTCC CCGGATTTCG GGGCCAAAAG CGTGCTGGAC 
CGGTTCGGCC AGAGTTCTCC CAAAGTGCTG TTTGCCGCGG ACGGCTATTT TTTCAAGGGC 
AAAGCCATCG ACAGCCTGCC CCGGATTCGC GAGGTGTGCG GCGCGCTTTC CGGCCTTGAA 
AAGGTGGTTA TTGTGCCTTA CACCCGGCCG GACCCGGAGA TCGGCACCCT TGAAAAGGCG 
GTGCTGTTTT CCGATTTTCA GGACCCCGAT GCCCGCACCA TAGACTTTGT TCAACTCCCC 
TTTGATCATC CCCTTTACAT CATGTATTCC TCCGGCACCA CCGGCCCGCC CAAGTCTTTT 
GTGCAGGGAG CCGGCGGTGT GCTGATCCAG CAGTTGAAGG AGCAGGTGCT GCATACCGGC 
CTGACCCGGG ATGACACGAT TTTTTATTTT ACCACCTGCG GCTGGATGAT GTGGAACTGG 
CTGACCTCTG CCCTTGCCAC CGGCGCCACC GTGGCCCTGT ATGACGGCAG CCCCTTTCAT 
CCGGGCCCGG GTGTGCTGTG GCGGTATGCC GAAAAAGAGG GCTTTACCGT GTTCGGCACC 
AGTGCCGGGT ATCTGGCGGC CCTGCGGGAT TCCGGGTTTT GCCCCGGTGA CAGTCACAAC 
CTGTCGCCCC TGAAAACCCT GCTCTCCACC GGTTCTCCTT TGAGCCCGGA CGGGTTTGAC 
TTTGTCTACG GCAAAATCAA GGCCGACCTT CAACTGGCCT CTATTTCCGG GGGCACGGAC 
ATCAACAGCT GTTTTGTGCT GGGCAATCCC ATGGGGCCGG TCTACGCGGG CGAAATCCAG 
TGCCGGGGCC TGGGCGTCAG GGTGGCCGCC TATGATGAGC AGGGCAGGGC CGTGGTCAAC 
CGGTCCGGCG AACTGGTGTG CGAGGCGGCT ATCCCTTCCA TGCCGCTTTA CTTCTGGAAC 
GATCCGGATG GCGAAAAATA CCGGCAGGCC TATTTCGGGC GGTTTCCCGG CGTCTGGACC 
CACGGCGATT TTATCCAGAT CAACGACAAC GGCGGCGTGG TGATCTTCGG CCGGTCCGAC 
GCCACCCTGA ATCCCGGCGG GGTCCGCATC GGCACCGCTG AAATCTACCG CCAGGTGGAG 
ACCCTGGACG AGGTGGAAGA CGCCCTGGTG GTGGGCCAGA ACTGGAAAAA CGACGTGCGG 
GTGATCCTGT TTGTAAAGCC CGCGCCGGGC CACGAGCTGA CCGATGCATT AAAAGAAAAG 
ATTCGGGCCG TGATCCGGGC TAATGCCTCG CCCCGCCATG TGCCGGCAAA GATTGTGGCG 
GCCCCGGACA TTCCCTATAC GTTAAACATG AAAAAGGTGG AGCTGGCCGT GAAAAAGATT 
CTGGACGGCA AAGACCCCGG CAACCGGGAC GCTTTGAAAA ATCCGGAGTC CCTGGATTTT 
TTCATGGGCC TGGAGGATTT GATTGAACAC CGTTGA 

 

Protein sequence

MSRLLWQPSP ERVRGSNMYR FMEKVNQAHG TRFQGYDDLY RWSVDHIPDF WARVWDFTGI 
RSSAPYTEVV DDPLKMPGAK WFSGARLNFA ENLLRHRDDH TALVFCSEGE RHRLLTYAQL 
YAGVAKTAAA LKALGIAPGD RVAGFMPNMP EAVIAMLAAA SLGAVWSSCS PDFGAKSVLD 
RFGQSSPKVL FAADGYFFKG KAIDSLPRIR EVCGALSGLE KVVIVPYTRP DPEIGTLEKA 
VLFSDFQDPD ARTIDFVQLP FDHPLYIMYS SGTTGPPKSF VQGAGGVLIQ QLKEQVLHTG 
LTRDDTIFYF TTCGWMMWNW LTSALATGAT VALYDGSPFH PGPGVLWRYA EKEGFTVFGT 
SAGYLAALRD SGFCPGDSHN LSPLKTLLST GSPLSPDGFD FVYGKIKADL QLASISGGTD 
INSCFVLGNP MGPVYAGEIQ CRGLGVRVAA YDEQGRAVVN RSGELVCEAA IPSMPLYFWN 
DPDGEKYRQA YFGRFPGVWT HGDFIQINDN GGVVIFGRSD ATLNPGGVRI GTAEIYRQVE 
TLDEVEDALV VGQNWKNDVR VILFVKPAPG HELTDALKEK IRAVIRANAS PRHVPAKIVA 
APDIPYTLNM KKVELAVKKI LDGKDPGNRD ALKNPESLDF FMGLEDLIEH R