| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1234 |
|---|
| Symbol | |
|---|
| ID | 5694068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1472403 |
|---|
| End bp | 1473191 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641263827 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001529117 |
|---|
| Protein GI | 158521247 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACATC TTTCTGAAAA AGGATTTTCG TTTATTGCCG AGCCGTGGCC CATGGTGCCC
GGCCGGCCGG TGGTGGTGTG TGTTCACGGT GCCGGCATGT CCGGGTATTT CTGGGTTAGA
CAGGTACAGG GGCTTTCTCC GGTTGCCAAC ATGGTGGCCA TTGATCTGCC CGGCCACGGC
GGGAACCGGG CAGCCGGCGC TGATACTGTT GAAGCCTATG CCGGTCATGT ACTGGCCTTT
GTGGAGGCTT TGGGGTTTGA CAGGCCGGTG CTGTGCGGCC ACAGCATGGG CGGGGCCGTG
ACCCAGCATC TGCTGGCTCA TCATCCCGGC AGGTTTACCG GCGGCATACT GGCCAATACC
GGGGCCCGGC TCAAAGTGCT GCCGCTGGTG TTTGAGACCC TGCAAAAGGG AATGCAGGCG
TTTGCGGACC TGACCCTGGC CACAGCCATC TGTCCGCAAA ACAAAACCGA TGAAACAGAA
CAGATCATTC AGAACGCCGC AGTCACCGAC CCGGCGGTGG CCATCGGTGA CTTTAATGCC
TGCAACACCT TTGACCTGAT GAACCGGATC GGGGAGATTG CGGTGCCGGT GCTGGTGATC
GGCGCCGCGG ATGATCTGTC CACCCCGGCC AAATATGCCG CCTTTCTTGC TGACCGCATT
CCCGGCGCCC GCCTGAAGAT GGTGGAATCG GCCGGCCACA TGGCGCCGCT GGAAAAGCCC
GATGAGATCA ATGCGGCAGT GAGCGATTTT TTGAAAGAAG TGCTGCACAA GGGTGGGGAT
AGTTGGTGA
|
|---|
| Protein sequence | MEHLSEKGFS FIAEPWPMVP GRPVVVCVHG AGMSGYFWVR QVQGLSPVAN MVAIDLPGHG
GNRAAGADTV EAYAGHVLAF VEALGFDRPV LCGHSMGGAV TQHLLAHHPG RFTGGILANT
GARLKVLPLV FETLQKGMQA FADLTLATAI CPQNKTDETE QIIQNAAVTD PAVAIGDFNA
CNTFDLMNRI GEIAVPVLVI GAADDLSTPA KYAAFLADRI PGARLKMVES AGHMAPLEKP
DEINAAVSDF LKEVLHKGGD SW
|
|---|
| |