Gene Dole_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1223 
Symbol 
ID5694057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1460666 
End bp1461742 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content61% 
IMG OID641263816 
Productradical SAM domain-containing protein 
Protein accessionYP_001529106 
Protein GI158521236 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0147811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCATC CTTCACACCC CGCCCATACC GGCCAGGACA AAGGCGCACA ACTGCGCCTG 
GTAGCCTGGG AAACCACCCG CAACTGCAAC CTCTCCTGCC GTCACTGCCG GGCATCGGCC
ACCTGCGGCC CCTATGCCGG GGAGCTGGAC ACCGAGCACT CCCTGCAACT GCTCGACCAG
ATCGCCCAGG TGGGAAAACC CATTATTATC CTCACCGGCG GCGAGCCCCT GCTGCGGCCC
GATATTTTTG AAATCGCAAC CCACGGCACA AAGCTGGGGC TGAGAATGGT CATGGCGCCC
AACGGCACCC TGATCACCGA AGAGACGGCC CGGCGCATGG CCGAATCCGG CATCCAGCGT
ATCAGCATCA GCATTGACGG GGCCGACAAA CAGAGCCACG ACGCCTTCCG GGGCGTGGAA
GGGGCCTTTG AAGGTGCCCT GCGCGGTGCC CGGCTGGCCA AAAAAGCGGG CATTGATTTT
CAGATCAACA CCACCGTGAC GCAGGTCAAC ATGGACCAGG TGCCGCAGAT TCTTGAACTG
GCCGAGTCCA TCGGGGCCGT GGCCCACCAT ATCTTTTTGC TGGTGCCCAC CGGCCGGGGC
AAAGACATGG CAGACCAGGC CATTTCCGCG GACGATTACG AAACCACCCT CAACTGGTTT
TACGACCGCC AGAAGGTCAC GTCCCTGCAA CTCAAGGCCA CCTGCGCGCC CCAGTACTAC
CGGGTGCTGC GCCAGCGGGC AAAAAAGGAC AATATCTCCA TCTCCTTTCA GACCCATGGC
CTGGACGCGG TGACCCGGGG ATGCCTGGGC GGGATCTCCT TCTGCTTTAT CTCCCATGTG
GGCGTGGTAC AACCCTGCGG CTTTCTGGAG TTAAACTGCG GCGACGTGAC AAAAGAGACC
TTTCCCCATA TCTGGAAAAA CTCGGCGATC TTTAACGACC TGCGGGACTT TGGCAAGCTG
AAAGGCAAGT GCGGCCGCTG CGAGTTTAAA CGGGTCTGCG GCGGGTGCCG TGCCCGGGCC
TTTGAGGCCA CCGGCGATTA TCTGGAGGAG GAGCCCCTCT GCGCCTACGA ACCTTGA
 
Protein sequence
MSHPSHPAHT GQDKGAQLRL VAWETTRNCN LSCRHCRASA TCGPYAGELD TEHSLQLLDQ 
IAQVGKPIII LTGGEPLLRP DIFEIATHGT KLGLRMVMAP NGTLITEETA RRMAESGIQR
ISISIDGADK QSHDAFRGVE GAFEGALRGA RLAKKAGIDF QINTTVTQVN MDQVPQILEL
AESIGAVAHH IFLLVPTGRG KDMADQAISA DDYETTLNWF YDRQKVTSLQ LKATCAPQYY
RVLRQRAKKD NISISFQTHG LDAVTRGCLG GISFCFISHV GVVQPCGFLE LNCGDVTKET
FPHIWKNSAI FNDLRDFGKL KGKCGRCEFK RVCGGCRARA FEATGDYLEE EPLCAYEP