| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1217 |
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| Symbol | |
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| ID | 5694051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1451279 |
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| End bp | 1452595 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641263810 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001529100 |
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| Protein GI | 158521230 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.87899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGC GTTTTATTAC AACCGCCTTT GTCTGCATGG CCTGCATGGT CATGAGCGTC
AATGCGGAAG AGATGCAGGC ACCGCCGGCG GCATACGACC TGCCCGGTCT TTACCGGCTG
GCCCTGGAGC GGGCCGAGGC CATCAAAATT TCCGAGGCCG ATCTGGGTAT TGCGCAAAAT
TACAAAAAGG CCGCCTTTTC CGCCCTGGTG CCCAAGGTCT CGGCCTTTAA CAGCTACACG
CACTATACGG AAACCAATAC CGTTCAGCCC GACTGGTCCA ACACCTGGGG CGGGCTGCTG
ACCTATACAT TTACCCTGAA CGGCCGGGAG CTGCTGGCCT TCGGCATTGC CGCGGACAAT
ATCGAAGGCA GGGAGCACCA GCTGCGCGCG GCAAAGGAGA GCTACCTTCT GATGGTGGCC
GCCACCTATT ACGACGCGCT CAAGGCCACC GAGATGGAAA AGGCGGCCGA AGAGAACATG
GATCGGCTGG AACAGCACAA GGCCGCGGTA GAGGCCCGGC TGCGGCTGGG CGTGGTGACC
CGGCCCGATG TGTACCGGGT GGAAGCCGAG CTTTCCAGCG CCCAGGCTGA CCTGACCGAT
GCGCGAAACG CCCGCTTCCT GGCCGAGTCG TCCCTTGGCC GGGCCGTTGG CCTTGAGGGG
AACTTTGCCC TTGTTCCCCC CGACACCATG GGCATCACGC CCCTGGCCGC CGAACGCCTG
GAGCAGCTTC AACACCAGGC CCTGCAACAG CGGGCCGACC TGAAGGCCGG CAGGGTGGCG
GAAAAGATGG CCCAGTCCCA GATAAAGCTG GAAAAAAGCG CCTACTGGCC CACGGTGTCG
CTGGAAGGCG GGTACACCAG CACCGAGGCC GACCCGGAGG TGTTCTCTCC GGAAGATGAG
AGCATTTACG GCAGCGTGAC CGTCAACGTG CCGATCTTTG ACGGCGGGCT GCGAAAGGCC
AACACCGGCA CGGCCAAAGC CGAACTGGAA AAGGCCCGGC TGGGACGGGA GGCCCTTGAA
AAAGACATTC GGGTGGAAGT GGAACAGGCA TGGCGCGAAC TCTTTTCAAA ACTGGAACGG
CGCAATGCCC TGGCCGACAA GCTGCGCTTT GCCCGGGAAA ACTTTAACGC GGTCTCCAAA
CAGTTTGACA ACGGCCTGGC CACCAGCATC GACAGGATTG ACGCCAACAC CCTTTATACC
CAGGCGGCCA AGGAGCTGGC CGCCGCCGAA TACGCGTGCG CCGTTGCCGC CCTGCGCCTG
GAAAAGGTGA CCGGCGTCTT TTTGGAAACC GTCATGGGAG TTCTGGACAA CACATGA
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| Protein sequence | MKTRFITTAF VCMACMVMSV NAEEMQAPPA AYDLPGLYRL ALERAEAIKI SEADLGIAQN
YKKAAFSALV PKVSAFNSYT HYTETNTVQP DWSNTWGGLL TYTFTLNGRE LLAFGIAADN
IEGREHQLRA AKESYLLMVA ATYYDALKAT EMEKAAEENM DRLEQHKAAV EARLRLGVVT
RPDVYRVEAE LSSAQADLTD ARNARFLAES SLGRAVGLEG NFALVPPDTM GITPLAAERL
EQLQHQALQQ RADLKAGRVA EKMAQSQIKL EKSAYWPTVS LEGGYTSTEA DPEVFSPEDE
SIYGSVTVNV PIFDGGLRKA NTGTAKAELE KARLGREALE KDIRVEVEQA WRELFSKLER
RNALADKLRF ARENFNAVSK QFDNGLATSI DRIDANTLYT QAAKELAAAE YACAVAALRL
EKVTGVFLET VMGVLDNT
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