| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1216 |
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| Symbol | |
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| ID | 5694050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1450143 |
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| End bp | 1451282 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641263809 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001529099 |
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| Protein GI | 158521229 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.152303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACGC CATACACAGA AGGGCCGATC AAAAGGCCCC TTGCCAAACG GACCCTGCGG
GCCATTCTCG GCTACGGAGT GCCCGCGCTG GTCATTGTTC TGCTGATTGT TATTTTCATG
GCACGGAAAG CGGGGGTGGA TACCCGGCGC CAGGCCGAAC TGGGGCAGGA CCAGGCCGCA
GTGAACGTGG TGACTTACAC GGTGGCCCCC CGCGACATTT CCGACCGCAT CAACCTGCCC
GGCACCCTGT CGGCCTGGGT CAACCTCAAC GTGGTGTCCC AGGTGGCGGG CGAGGTGCTT
GAAAAAAACG CCCGTGACGG GGCCGTGGTG AAAAAGAACG AAAAGCTGGC GGTCATTGAT
TCGCGCAAAT ATAAGAACGC CTATGACGCG GCCAACGCAT CCCTGGAGTC GGCCCTTGCC
ACGCAGCAGC GCCTGACCGA GCTTTACAGG GAACAGCTGG CCAGCAAGTC GGACCTGGAC
GCGGCCAATG CCGCGGTGGA GAACTACCGG GCCGCCATGG AAACCGCCGC CCTGGACCTG
GACCGGTGTG TTATCCGGGC GCCCATTGCC GGCATTATCA ACCGGGTGTT TATTGAAAAG
GGCCAGGTGC TGGCCCCCGG CCAGGAAGTG GCCGAAATTC TGCAGATCGA CCCGGTAAAG
GTCACCGTGG GCATTCCCGA GTCCGACGTG CCGTCAGTGC GCGGGCTTGA AGAATTTACC
GTGACCATTG CGGCCCTGGG CGGCCAGACC TTTTCCGGGA AAAAACACTT TCTGTCCAAA
ACCGCCGACC CCATGGCCCG GCTCTATGAC CTGGAAATCC TGGTGAAAAA CCCGGATGCC
CGCATTCTGC CGGACATGTT CGCCCGGGTG AACGTGGTCA AGAAAACCGT TGAAAACGCA
GTGGTGATAC CCCTTTACGC GGTGACATCC AACGCCGTTC ATACCGTTAT GGTGGAAAAA
GAGGGGATGG TCCACCGCCG TGAAGTGACC CTGGGCATCA CGGAGGGATT TAACGTGGAG
ATCTCCTCCG GCCTTGCCTT CGGCGAGCAG GTAGTGGTGA TGGGCCAGAA GCAGGTGGCC
GACGGCCAGC CCGTCAATGT CACGCGAACC GTTACCGATC CTGAGGCGGC AATGCAATGA
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| Protein sequence | MNTPYTEGPI KRPLAKRTLR AILGYGVPAL VIVLLIVIFM ARKAGVDTRR QAELGQDQAA
VNVVTYTVAP RDISDRINLP GTLSAWVNLN VVSQVAGEVL EKNARDGAVV KKNEKLAVID
SRKYKNAYDA ANASLESALA TQQRLTELYR EQLASKSDLD AANAAVENYR AAMETAALDL
DRCVIRAPIA GIINRVFIEK GQVLAPGQEV AEILQIDPVK VTVGIPESDV PSVRGLEEFT
VTIAALGGQT FSGKKHFLSK TADPMARLYD LEILVKNPDA RILPDMFARV NVVKKTVENA
VVIPLYAVTS NAVHTVMVEK EGMVHRREVT LGITEGFNVE ISSGLAFGEQ VVVMGQKQVA
DGQPVNVTRT VTDPEAAMQ
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