| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1201 |
|---|
| Symbol | |
|---|
| ID | 5694035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1435427 |
|---|
| End bp | 1435885 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641263794 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_001529084 |
|---|
| Protein GI | 158521214 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000963836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCG CCAGAGATAT CATGACAAAA GAAGTGATTA CCGTATCGCC GGAAACCGAC
ATCGCTCAGG CCACCCGCCT GCTGCTGGAA AACCATATCA ACGGGGCGCC GGTGGTAAAC
GCGGATGGGG AACTGGTGGG CATGCTCTGC CAGAGTGATC TTATTGTTCA GCAGAAAAAA
ATCCCCCTGC CGTCCATTTT TACTTTTTTG GACGGCGTTT TTTCATTTTC CTCCACCAAG
TCCCTTGAAA AGGAGATGCA AAAAATCGCG GCCACCACCG TGGCTGACGC CATGAGCACG
GACCCGGTGT CTGTGACACC GGATGCCACG GTAGAGGATG TGGCCTCACT GATGGCGGAA
AAACATTTTC ACACCATTCC GGTGGTGGAA AACAGTAAAG TCGTTGGGGT TCTGGGCAAG
GAGGACGTGC TCAAGACCCT GGTGGGAGGG AAAGGATAG
|
|---|
| Protein sequence | MIRARDIMTK EVITVSPETD IAQATRLLLE NHINGAPVVN ADGELVGMLC QSDLIVQQKK
IPLPSIFTFL DGVFSFSSTK SLEKEMQKIA ATTVADAMST DPVSVTPDAT VEDVASLMAE
KHFHTIPVVE NSKVVGVLGK EDVLKTLVGG KG
|
|---|
| |