Gene Dole_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1180 
Symbol 
ID5694014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1408186 
End bp1408719 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content56% 
IMG OID641263773 
Producthypothetical protein 
Protein accessionYP_001529063 
Protein GI158521193 
COG category[S] Function unknown 
COG ID[COG1636] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTCC TGATTCACAT CTGCTGCGCG CCCTGTTCCA TCTATCCGGT ACGGGTGCTG 
CGGGAAGCGG GCATGGAGGT AATGGGGTTT TTCTACCGGT ATAACATTCA CCCCTTTACC
GAGTGTCTGA AACGGGAGAA TGCCCTGAAA GACTATACCC CGTCCATTGA CCTGCCCGTG
ATCTATCAGC AGGGCTACGA CATCGAGCAG TTTTTTCGCA GCGCGGTTTA CCGGGAGTCC
CGGCGGTGCC TGGGCTGCTA CCACGAACGG CTCAGGACCA CGGCCCGCAT GGCCAAAAAG
GGAAAATTCG ACGCGTTCAC CTCAACGCTT CTTTACAGCA AGTTTCAGAA CCACGAGGCC
ATTCGGGAGA TCGGCGAATC CGAGGGCAAA GCCGCGGGCG TGCCGTTTTA TTACCAGGAT
TTTCGTGACG GGTGGAAAGA GGGCATTGCC GTGTCAAAGG AGCTGGGCAT GTACCGCCAG
CAGTACTGCG GCTGCATCTA CAGCGAAAAG GAGCGGTACT ACGACAAGTC GTAA
 
Protein sequence
MKVLIHICCA PCSIYPVRVL REAGMEVMGF FYRYNIHPFT ECLKRENALK DYTPSIDLPV 
IYQQGYDIEQ FFRSAVYRES RRCLGCYHER LRTTARMAKK GKFDAFTSTL LYSKFQNHEA
IREIGESEGK AAGVPFYYQD FRDGWKEGIA VSKELGMYRQ QYCGCIYSEK ERYYDKS