| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1173 |
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| Symbol | |
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| ID | 5694007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1401956 |
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| End bp | 1402543 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641263766 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001529056 |
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| Protein GI | 158521186 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.79573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACATT ACAGGATCAT AAGAGGGCCG GCAGGGCGGA TGCTTCTGGC ACTTCTTTTT
GTTGTTGCCG GGCCGTCGTT TCTGAATGCC GATGTCTACA AGCACATCGA CAAGGACGGT
GTGCTCCATT TTACCGACCG GCCCGGGGGT GACGGATTTT ATCTTTACCT GTCGGTGGAC
GAAAAGGGTT CCACCGCTTA TGACCGATCC GACTATGACA CCTGGATTCA GGAGGCGGCG
GGAAAATACC GGATCTCTTT CGGTCTGCTC AAGGCCCTGA TCAAGGTGGA ATCCAATTTC
AACGCCCGGG CCGTCTCTCC GGCCGGCGCA AAGGGGCTGA TGCAGATCAT GCCCCACAAT
TTCCGGGCAC TCGATATTCG TGACCCCTTT GACCCCTACC AGAACATCAT GGGCGGCGCC
CGGTATCTTC GAGAAATGCT CAACCGGCAT AACGGCAACC TGCAACTGGC CCTGGCCGCC
TACAATGCCG GGCCCAATGC CGTGGCCCGG TATGGCCGCG TTCCTCCCTA TACCGAGACC
ATGGACTACG TCCGGAAGGT GATGAAGTAT TATATCGTTT ACAAATAA
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| Protein sequence | MTHYRIIRGP AGRMLLALLF VVAGPSFLNA DVYKHIDKDG VLHFTDRPGG DGFYLYLSVD
EKGSTAYDRS DYDTWIQEAA GKYRISFGLL KALIKVESNF NARAVSPAGA KGLMQIMPHN
FRALDIRDPF DPYQNIMGGA RYLREMLNRH NGNLQLALAA YNAGPNAVAR YGRVPPYTET
MDYVRKVMKY YIVYK
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