Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1165 |
Symbol | |
ID | 5693999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1390967 |
End bp | 1391611 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641263758 |
Product | dTMP kinase |
Protein accession | YP_001529048 |
Protein GI | 158521178 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTATCA CGCTTGAAGG TATCGAAGGG GCCGGCAAAA CCACCCAGCT TCCCCGCCTG GTCGATTTTC TGGAACAGCA CGGACATACC TGTGTAGTCA CCCGGGAACC GGGGGGCACC GGCATGGGGC AAAAGATCCG GTCCCTGCTG CTGGATCCGG ACAACAGTGA TATGTCGCCG GAGACCGAGT TGTTTCTTTA CGCGGCGGAC CGTGCCCAGC ATGTGCGCCG GCTGATCGAA CCGGCCCTGG CCGAGGGAAA AACCGTGGTG TGTGACCGGT TTGCCGACGC CACCGAGGTT TACCAGGGGT GGGCCCGGGG CCTTGACATG GAGCTGGTCC AGGTGTTGAA CCGGGTCGCC ACCGGGGGCC GGAAACCCGA CATCACCCTT CTGTTTGACC TGCCGCCGGA GGCAGGCCTG AAAAGGGCCT GGCAGCGCAT TGCGCGGAAC GGCAAGGAGG CGGCCGACTG CCGGTTTGAA AATGAAAAGA TGGCCTTTCA TGAGCGGGTG CGGCATGGCT ACCTGGACCT GGCCCGGCGG GAACCGGAGC GGTTTGTGGT GATCGACGCG CTCGGGCCGG CGGCCGAAGT GGCCGGCCGG ATGATCGCGG CCCTGGAACG GGTGCCGGAT ATCAATCGCC CGTGA
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Protein sequence | MFITLEGIEG AGKTTQLPRL VDFLEQHGHT CVVTREPGGT GMGQKIRSLL LDPDNSDMSP ETELFLYAAD RAQHVRRLIE PALAEGKTVV CDRFADATEV YQGWARGLDM ELVQVLNRVA TGGRKPDITL LFDLPPEAGL KRAWQRIARN GKEAADCRFE NEKMAFHERV RHGYLDLARR EPERFVVIDA LGPAAEVAGR MIAALERVPD INRP
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