Gene Dole_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1162 
Symbol 
ID5693996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1387709 
End bp1388611 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content53% 
IMG OID641263755 
Productputative acyltransferase 
Protein accessionYP_001529045 
Protein GI158521175 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.389136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGCT CTGTTTTCGG CGTGGTGCGC GGATCGCTCT CCATGCTCTG TTATGTGGTT 
AATACCGTGT TCTGGTGTAT TCCCCTCTAC ACCATTGCCC TTGTGAAATT GATTGTGCCG
GTTGCCTGGT TCCGCCGGAT CTGCAACCGT CTGCTGATAG CCGTCTCCTT TTCATGGATT
TTCTGCAACA ACATAAACCA GAAAATTTTC AGCCGGACCC CGATCATCGC GACGGGCCTG
GAAGGCCTCG ACCAGAAGGG GTGGTACCTG GTGGTGAGCA ATCACCAGAG CTGGGTGGAT
ATTTTGGTGC TGCAGCGGGT CTTTTATCAC AGAATTCCGT TTCTCAAGTT TTTTTTGAAA
AAAGAGCTGA TCTGGGTGCC TGTCATGGGG TTTGCCTGGT GGGCCCTGGA TTTTCCCTTT
ATGAAGCGGT ACTCCGGCGC CTTTCTTAAA AAATATCCCC ACCTGAAGGG AAAGGACATC
GAGATCACGA AAAAGGCGTG TGAAAAATTT TCCACCATGC CGGTGTCGGT GATGAACTTT
CTGGAGGGTA CCCGGTTTAC CACGGGCAAG CACGCCCGGC AGCAGTCCCC CTACGCCCAC
CTGCTGCGGC CCAAGGCCGG CGGTATCGCC TTTGTTCTTG CCTCCATGGG AGGATCGTTA
AAAAGCATCG TCAACGTGAC CATTGCCTAC CCACCCGGCC CCAAAAGTTT CTGGGACTTT
GTTTGCGGAC GGATTTCACG GATACGGGTG CACGTGGAAA CCATTCCCAT CACCGCAAAC
CTGATCGGCG ACTATTTTGA AGACGAGGCC TTTCGGAACC GTTTTCAGGT CTGGGTCAAC
GACCTGTGGG AGGCAAAGGA AAAGCAGATT CAGCAGCTCC ACGGTGAGTA TCCGCTCAAC
TGA
 
Protein sequence
MSGSVFGVVR GSLSMLCYVV NTVFWCIPLY TIALVKLIVP VAWFRRICNR LLIAVSFSWI 
FCNNINQKIF SRTPIIATGL EGLDQKGWYL VVSNHQSWVD ILVLQRVFYH RIPFLKFFLK
KELIWVPVMG FAWWALDFPF MKRYSGAFLK KYPHLKGKDI EITKKACEKF STMPVSVMNF
LEGTRFTTGK HARQQSPYAH LLRPKAGGIA FVLASMGGSL KSIVNVTIAY PPGPKSFWDF
VCGRISRIRV HVETIPITAN LIGDYFEDEA FRNRFQVWVN DLWEAKEKQI QQLHGEYPLN