Gene Dole_1147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1147 
Symbol 
ID5693981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1364536 
End bp1365627 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content59% 
IMG OID641263740 
Productpeptidase M48 Ste24p 
Protein accessionYP_001529030 
Protein GI158521160 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATT CGGAAAGAAG AATGATTACC ATCCACGGCA CATGGTATGA CGGGAGCACT 
TCCCTTCAAA GACCGGCGGT TTTAACGGTT TTGCCCACCG GCGCCGCCCG GGTGGGAACC
GCCGACAGTG ACAGCCCCCT GCTTGAACAG CACCGGCTGA CCGCCAGGGT CTCGGACCGC
CTGGCCCATA CCCCACGCGT GCTCACCTTT CCCGGCGGCG CGTCTTTTGA AACGCAGGAT
AACGTTGCCG TTGACACCGT CGTTAAAACC TATCTGAAAC CGCACTGGAG CCTGTGGGTC
CATCTGTTGG AATCCAGACT GCGGTATGTA CTGCCCGCCG TTATTCTTGT AATCCTGGTG
ATGGCCGCGA CCATCAGATA CGGCGTTCCT GCGGCAGCCG ACCTGATCGC CTCTCATCTG
CCGGCCTCGG CCTACAGCCT GGCCGACCGG CAGGCATTGA AAGCCCTGGA CAGAATCGCC
TTCAAACCGT CGGAGCTGCC GCCCGATACA GAAGCCCGGG TGCGCGGCAG CATGCAAGAT
TGCGTGGACG CACACGGCGC TTATGATATC ACCCTTGTGT TCAAAAAAGG CGGCCCCCTT
GGCCCCAACG CTCTGGCCCT GCCCGGGGGC ACCATTATTT TTACCGATGA ACTGGTTGAA
GTCGCCGAAC ATGATGAAGA GCTGACAGCC ATTCTGGCCC ATGAGGTCGG GCATGTGGTC
CACCGGCACG GTATGCGGCG AATGGTGCAG AGTTCACTGC TCTCTTTTGC CGCCATGGTC
CTGACCGGGG ATGCAAGCGG TGTCTCCGAA ATTTTTCTGG GACTGCCGGT GGTGCTGACC
GAACTGGCCT ATTCCCGGGA ATTTGAAAAC ACGGCCGACC AGTACGCCCT GGACTACCTG
AAATCGGCCG GCATCCCCCC TGCCCGGTTT GCAGACATCC TTACCCGTAT CGATAAAACC
AGCCGGCACG AAGCTGAAAA CGGAAAAACC TCCTGGACCG GTTATCTGTC CACGCACCCC
CCCACCCCGG AGCGCGTCAA AATGTTTTTA CAGGAAAACG GCCCCGTCGC GCAGGAAGAC
GCTCCCTTGT AA
 
Protein sequence
MTDSERRMIT IHGTWYDGST SLQRPAVLTV LPTGAARVGT ADSDSPLLEQ HRLTARVSDR 
LAHTPRVLTF PGGASFETQD NVAVDTVVKT YLKPHWSLWV HLLESRLRYV LPAVILVILV
MAATIRYGVP AAADLIASHL PASAYSLADR QALKALDRIA FKPSELPPDT EARVRGSMQD
CVDAHGAYDI TLVFKKGGPL GPNALALPGG TIIFTDELVE VAEHDEELTA ILAHEVGHVV
HRHGMRRMVQ SSLLSFAAMV LTGDASGVSE IFLGLPVVLT ELAYSREFEN TADQYALDYL
KSAGIPPARF ADILTRIDKT SRHEAENGKT SWTGYLSTHP PTPERVKMFL QENGPVAQED
APL