| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1145 |
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| Symbol | |
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| ID | 5693979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1361474 |
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| End bp | 1363693 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641263738 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001529028 |
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| Protein GI | 158521158 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTTT TCATGACAAT CGTTTCAGTT TTTTTTAGCC TTTCCATGGT TGCGCAGCCA
CTGTTCGCCA TGGCGCCGGC CCCGCCGCCG CCGTCTTTAA GATCGCAGTA TGTGGTTTCC
GGCAATAACG TGTCTGCTGT AGTAGAAACC CGGCCTTTTC GCCTGCTCAT CAAGGATGGC
GGCGGGCGAA CCGTACTGGC TTCGATCAAT AGCAACACCC CGATTTTCAA TCCGGATTGT
AATTACTGCG AACCCGACCT GATGGGAGAG TTCTGGTCTT TTCCACCGAT TATCTGTGAC
AGCTATCACC CGTTGCACTT TGAAATCGGC GGGCCTGAAA CCTTTGACTT TATCGATCTG
CTTGTCGTCG AGCCGATGCA GGTCTATCGC GACGCCAAAC TCTGTTTTGC CACGGACGTG
ATCAAGGTGA GTGATTCCGG TAACGGGAAA AAATTCAAAT TAAAAACCAC AAAAGACAAC
ACAACAGTTG ATGTCCTTGT CGAACCGGAC CCGTCGGGCG TGAAAGCCAT ACGGATCTCA
GCCACGGTAA ATGACCCGCG CGCCCAAAAC ATCAGTTTCG CTTTTACCAG TCATCACAAT
GAATCCTTTT ATGGATTCGG GGGGCGTCGC GGCACACTTG ATCAAAAAGG TCATGCGCTC
TATTCATGGA CCATGGACGC CATGGCACAG AACGCTATAG TGGGCAAATA CTCTCTTTCC
CGGGCCTATG GACCGCAGGC GCTGTTCTAT TCTTCGGAAG ACTACGGTTT TCTGCTTGAA
AACAGTGAAC TGGCGCGGTT CTATATGGGA AATGATCGCG AAGATGCCTG GAAAGTCAAT
GTCTCTTCCA ACAGCGCCGC CTTTGTTGTG AGTGCCGGGG ACCACAAACA GAACATCGAA
AGTATAACGG CCATTAACGG CCGTCACCGC CCGATTCCCG ATTGGGCCAA AGGATTGATA
TTTGCCCAGC GATCGCCCAT AACCTTAATT GGTGACGCCG AACCCGGGGC CTATTTCAGA
GACGCCATGG CGTATTTACA GAAATTAACG GAACTGAATA TTGAGACAAG CGGATACCTT
ATCGAGGCAT GGGCATCTTC CGCCAATCTT ACCAAAGCAG AGCTGGACCT GTTGCTGGCA
GAGCTTAATC GTCTGGATAT CAAGCCATTA ACCTATATGC GGATGATGCT GACCGATGAT
TCTCTGAACA CGGAAGATCC GGAAATCTAT TACCAGGCCT ACGACAATGG TTATATGCCC
ACCCGGGCAG ACGGTTCACC CTATGCCTAC CCGGTACTTA TGGCACCCAC CAGTGTGACG
GATTATACCA ACCCGTTTGC GCTCGACTGG TGGGAACAGC GGGTTACCGG TATGCTGGAT
CTGGGCAGTG GCGGCTTTAT GTTTGACTTT GGCGAACAGG TCCGGCCTGA CATGCAGTTC
TATAATGGTG AAACCGGACG CAGCATGCAT AACAGGCTGC CGGTCCTGGG CAATAAAGAA
ACGGCCCGGA TTGTCGATGA CTACGAACAG GCCCATCCGG GGCGGGACAT TTTCTTTTTT
ACCCGCGCCA ATTACTCCGG GCGACCCGGT TCAGCGGCCT ACGAAAACGC CCAGTTTCTC
GGGGACAATA CCCAGTCCTG GGATGCCGGC ACCGGCCTTA AGTCGGTCTT ACCGGATATT
CTCAACCGGA GCCTGGGCGG TGCCTATAAT ACGACAACAG ATATCGGGGG GTATTGGGAT
CTCTACGGCG TTGCCGGTAA AGAACTCTTT ATCCGCTGGA CCCAGCTCGC AACCTTTGGG
TCCGTATTCA GGCTTCATAA TTCACCTTTC ACGCCGCTGA AAACACCCTG GTCCTATGAT
GATGAAACGG TACGGATTTT CAAGTCCGTT CTTGCGCAGA GAAAAAAAGC CATGCCGTAT
ATGAACACGC TCTGGGAAAC CGCGGCTGCC ACCGGACTGC CGCTGTGGCG GCCCATGTGG
CTGGAGTTCC CTGACGACGA TCGATTTCGA AACGAAATGG GGCAATTCAT GTTAGGCGAC
AAGGTTTTGG TTGCCCCGGT ATTGGACCGG GGGAAACGCA CCAAATCGGT AAAGTTGCCA
GAAGGGTGCT GGCAGTATAT AAATACAGGC AAGGTTTATC AGGGCGGGCA GACGGTTATC
GTGGGTGCCC CCCTGGATGT TTTGCCCTGT TTCTTCAGGT GCGGAGAGTC TCCTTTTTAA
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| Protein sequence | MQFFMTIVSV FFSLSMVAQP LFAMAPAPPP PSLRSQYVVS GNNVSAVVET RPFRLLIKDG
GGRTVLASIN SNTPIFNPDC NYCEPDLMGE FWSFPPIICD SYHPLHFEIG GPETFDFIDL
LVVEPMQVYR DAKLCFATDV IKVSDSGNGK KFKLKTTKDN TTVDVLVEPD PSGVKAIRIS
ATVNDPRAQN ISFAFTSHHN ESFYGFGGRR GTLDQKGHAL YSWTMDAMAQ NAIVGKYSLS
RAYGPQALFY SSEDYGFLLE NSELARFYMG NDREDAWKVN VSSNSAAFVV SAGDHKQNIE
SITAINGRHR PIPDWAKGLI FAQRSPITLI GDAEPGAYFR DAMAYLQKLT ELNIETSGYL
IEAWASSANL TKAELDLLLA ELNRLDIKPL TYMRMMLTDD SLNTEDPEIY YQAYDNGYMP
TRADGSPYAY PVLMAPTSVT DYTNPFALDW WEQRVTGMLD LGSGGFMFDF GEQVRPDMQF
YNGETGRSMH NRLPVLGNKE TARIVDDYEQ AHPGRDIFFF TRANYSGRPG SAAYENAQFL
GDNTQSWDAG TGLKSVLPDI LNRSLGGAYN TTTDIGGYWD LYGVAGKELF IRWTQLATFG
SVFRLHNSPF TPLKTPWSYD DETVRIFKSV LAQRKKAMPY MNTLWETAAA TGLPLWRPMW
LEFPDDDRFR NEMGQFMLGD KVLVAPVLDR GKRTKSVKLP EGCWQYINTG KVYQGGQTVI
VGAPLDVLPC FFRCGESPF
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