Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1138 |
Symbol | |
ID | 5693972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1352718 |
End bp | 1353755 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641263731 |
Product | diguanylate cyclase |
Protein accession | YP_001529021 |
Protein GI | 158521151 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAAGAG CATTTTTAGC GCTTTCCGGG TATTTTGTTA TCTTCCTTGC CACCCTGATC TGTCATTCCG GGGGGGCGAC CAATCATATT ACACTGAATG GTATTTTTCT GCTGTTTCTG TCCCTGCTGG TAATCTATAC CGGCATTTTT TTCATGATTT ATTCAGGGGC AAACCGTAAA TTCAAAGACC CCAGCCTGAC CGTCTTTCAA TTGTCCGTCG CCATCTGCTG GGCCGCGGTG ATGGCTTACT TCACCGGTCC GAACATCCGG GGCAGTATCA TCACGATCTA TATTCTGATG TTTATGTACG GTATTTTCCA GTTGCGGTTT CGCGCCTTTC TCGCCCTCGT CGCCATGGCG GTCACGCTGT ATGTTTTTTC CATGATGCTG CTTTATCGAA ACCATCCCGA ATCGATTGAC GTGATGACGG AAATTATCCG TACCATGATC CTGTTTATCG CCTTGCTGTG GGTCTCATAC ATATCCACCT ATGTTTTCAG GTTAAGGCAA AAGGTCAAGC TGCTGGCAAC GCGCGACCCC CTGACCAATG TTTACAACCG GCGGGAAATT CTTGAAATCC TAAAACGGGA AAAATCGTTT TCAGACCGCG CCGGATCACC GTTTACCCTC TGCATCCTGG ACCTTGATGA TTTTAAAAAC GTCAATGATA TATACGGGCA TCAGGCCGGG GATACGGTTT TAAAAGCGTT TGCCCGAACG ATCCGAATGA ACATTCGGAC AGAGGATTAT CTGGGCCGTT ACGGAGGCGA GGAGTTCTTT GTTATTTTTG TGAGCAGTGA CTGCAATGAC TGCAACCCCG CCTGTGTGGA GCGCCTGCTG TCGGCCACGC GGCAACTCTC TTTTCCTGAA ATCGACAGGA ACCTGCGGAT CACCGTATCC ATCGGCGTCA CGGCTTATGT CCAGACCGGT GTTTCGATTG ACACGCTGAT CTCCATGGTG GATGAAGCCC TTTACAGGGC CAAGGCCGCT GGAAAGGACA GGGTTGAATA CAGCAAACCC TTGGCATACA AGGGCTAA
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Protein sequence | MRRAFLALSG YFVIFLATLI CHSGGATNHI TLNGIFLLFL SLLVIYTGIF FMIYSGANRK FKDPSLTVFQ LSVAICWAAV MAYFTGPNIR GSIITIYILM FMYGIFQLRF RAFLALVAMA VTLYVFSMML LYRNHPESID VMTEIIRTMI LFIALLWVSY ISTYVFRLRQ KVKLLATRDP LTNVYNRREI LEILKREKSF SDRAGSPFTL CILDLDDFKN VNDIYGHQAG DTVLKAFART IRMNIRTEDY LGRYGGEEFF VIFVSSDCND CNPACVERLL SATRQLSFPE IDRNLRITVS IGVTAYVQTG VSIDTLISMV DEALYRAKAA GKDRVEYSKP LAYKG
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