| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1123 |
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| Symbol | |
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| ID | 5693957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1332788 |
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| End bp | 1333861 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641263717 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001529007 |
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| Protein GI | 158521137 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0998424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCTGGT TGATTTCCAA AGATGACCAT CGTCAGGCCC TGCGGATGCG GCGGTCCCTG
ATCGCGCTGA CCGGCTATGT GGTGATTACC CTGGGCTCCA CGCTGATAGC ATCGGCCGGC
CTGATTCGCG GCAACACGCT CACCGTGCTG GCCCTGGTGA TGGGCCTGTT TGTCCTGATG
GCCGTTTTTT TCCCGGCGCT GATATACACA GGCTTCAACA GGCGTTTCAA AGACCCCAGC
CTGACCATGC CCCAGCTGCT CCAGGCTATT TTCTTTGTCA CGGTTTTCAG TTACTTCATG
GTCAGTGAGA TTCGCGGGGT CAGCACGGTA CTGTATATTC TGGTGTTCGT GTTCGGCACC
TTCCGGCTCA GGCTGAGGGA GTTCATGGGC CTGGTGGCGC TGACCGTGGC CCTGTATGCC
GGGGCCATGG CCCTGCTCCA TTACCGCCAC CCGGAGGCGG TGACGGTGAA ACTGGAGATC
ATTCGAGGCG CCATCCTGGT GCTGTCGCTG CTGTGGGTCT CCTACATGGC CAACTATATC
GCCAACCTCC GGCGGCGCAT CAAGGAGATG GCCAGTTTCG ACGCCCTTAC AGAAGTTTAT
AACCGGCGGG AGATATTTGA AATTCTGGAC CGGGAAAAGT CTTTTTCCGA CCGTTCGGCC
ATTCCCTTTT CCCTGTGCAT CCTGGACCTG GATGATTTTA AGGAGGTCAA TGACACCTAT
GGCCACCAGG CCGGGGACGA GGTGCTCAAG GCCTTTGCCC GGGCTCTGCG GGAAAATGTC
CGCACCGAAG ATTACGTGGG CCGGTACGGC GGAGAAGAAT TTCTGGTGGT GTTTGTCAAT
TTTGAGTGCC GGGACAACAG CGTGACCTGC GTGGACAGGC TGTTAAAGGT GACGGAACGG
CTTACGTTCC CGGGCATTGC CGATGGCCTG AAAATCACCA CCTCCATTGG TGTTTCCGCC
TACCGGCCGT CAGAAACCAT TGACGCGGTC ATTGCCCGGG CCGACCAGGC CCTTTACGAG
GCCAAGGCCG CCGGCAAAAA CCGGATTGTC TGCAGCGAAC CCTGCGGCGC CTGA
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| Protein sequence | MTWLISKDDH RQALRMRRSL IALTGYVVIT LGSTLIASAG LIRGNTLTVL ALVMGLFVLM
AVFFPALIYT GFNRRFKDPS LTMPQLLQAI FFVTVFSYFM VSEIRGVSTV LYILVFVFGT
FRLRLREFMG LVALTVALYA GAMALLHYRH PEAVTVKLEI IRGAILVLSL LWVSYMANYI
ANLRRRIKEM ASFDALTEVY NRREIFEILD REKSFSDRSA IPFSLCILDL DDFKEVNDTY
GHQAGDEVLK AFARALRENV RTEDYVGRYG GEEFLVVFVN FECRDNSVTC VDRLLKVTER
LTFPGIADGL KITTSIGVSA YRPSETIDAV IARADQALYE AKAAGKNRIV CSEPCGA
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