Gene Dole_1113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1113 
Symbol 
ID5693947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp1325752 
End bp1326327 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content64% 
IMG OID641263707 
Producttranscriptional regulator, TrmB 
Protein accessionYP_001528997 
Protein GI158521127 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGAC CCACCTGTCA GCCGGCAGAC ACAGCCATCT CCAACCAGGT ACTGATCGCC 
ATTCGCCGCA TCATTCAGTC CGTGGACCTG CATTCCAGGG CACTGGTCCG GCAGTTCGGG 
CTCACCGGGC CCCAGTTAAT CGTGCTCCAA ACCATTTCTG TTCACCAGGA AGTTGCCATC 
AACGAGATCG CCAAGGCCGT GAGCCTGGGC CAGCCTACTG TGACCGGCAT CCTGGAGCGG 
CTGGAACAGA GGGGGCTGGT TGAACGGCGG CGGGGACGGC AGGACAAACG CAAGGTCTAC 
ATCACGGTGA CCGCCTCGGC CCGGCAGCTG CTGGAAAAGG CCCCTCCCCT GCTGCAGCAG 
CATTTTATCG AGTCTTTTCA CCGGCTGGCC GACTGGGAAC AGGCCATGAT CCTCAGCTCA 
TTGCAGCGCG TGGTGGCCCT GATGAACGCC CGGGACATCG ACGCGGCCCC GATTCTGGCC 
GAGGCCGGCC CCCTCAGCGG TGTTGATCCG CCCCCGCCGA AAAAAATGCC CGCAAAGCGG 
GGCCGCCCCG GAAAGGCAAA GACAGCGCGG GACTGA
 
Protein sequence
MNRPTCQPAD TAISNQVLIA IRRIIQSVDL HSRALVRQFG LTGPQLIVLQ TISVHQEVAI 
NEIAKAVSLG QPTVTGILER LEQRGLVERR RGRQDKRKVY ITVTASARQL LEKAPPLLQQ 
HFIESFHRLA DWEQAMILSS LQRVVALMNA RDIDAAPILA EAGPLSGVDP PPPKKMPAKR 
GRPGKAKTAR D