| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1103 |
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| Symbol | |
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| ID | 5693937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1313895 |
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| End bp | 1314731 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641263697 |
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| Product | cytochrome c assembly protein |
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| Protein accession | YP_001528987 |
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| Protein GI | 158521117 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0208072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAACG CTTATATTCT TTCTACAACC ACATTCGTAT ATGGCCTGGC CGTGGTGGCC
TATGTGGCGG CCTGGGCCTT TGAAAACCGG TTCGCCGGAA AGGCCGCCAC CACCATAACC
TGGATTGCGG TGGCCGCAAA CCTTGCCGGC ATTCTTGTCC GGTGGTTTGA ATCCCACCAG
ATGGGGCATG GCTATGTGCC ACTGTCCAAC CTCTATGAGT CGCTTGTCTT TTTCGCCTTT
GCCATCGGCG TGGTCTACCT GATGATTGAA CGGCGCTTCA AGACGCAGGC CTTCGGCGCC
GGCGCCATCC TGCTGGCGTT CATCGCCCTG GCCTACGCGT CTCTCTCCCC GGAAATAGAA
AACAAAATTC AGCCCCTGAT TCCGGCCCTT CAAAGCAACT GGCTCACGGC CCACGTGATC
ACCTGCTTTC TGGGATACGC GGCCTTTGCC ATCGCCTTTG CCGTCAGCGT TATTTACCTG
ATAAAGCAGG GGAAAGAGGG CGAGGACGCA AAACCGGCAT CCGCCTTTGT TCCTTCTTCA
GAAACCTTGG ACGAACTGAT TCACCAGACC GTGGTCTTCG GGTTCTTTTT CCTGTCCGTT
GGTATTATCA CCGGCGCGGT GTGGGCCAAC ACGGCATGGG GCCGGTACTG GGGATGGGAT
CCCAAGGAAA CATGGTCCCT GATCACCTGG TTCATCTACG CGGCCATGCT TCATGTGCGG
CTGATGCGGG GGTGGCAGAA CAAACGGATT GCGTGGTTTG CCATTGCCGG GTTTGCAGCG
GTGCTGTTCA CCTACTTCGG CGTGAACCTG CTGCCCGGCC TGCACAGCTA CCAGTAG
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| Protein sequence | MINAYILSTT TFVYGLAVVA YVAAWAFENR FAGKAATTIT WIAVAANLAG ILVRWFESHQ
MGHGYVPLSN LYESLVFFAF AIGVVYLMIE RRFKTQAFGA GAILLAFIAL AYASLSPEIE
NKIQPLIPAL QSNWLTAHVI TCFLGYAAFA IAFAVSVIYL IKQGKEGEDA KPASAFVPSS
ETLDELIHQT VVFGFFFLSV GIITGAVWAN TAWGRYWGWD PKETWSLITW FIYAAMLHVR
LMRGWQNKRI AWFAIAGFAA VLFTYFGVNL LPGLHSYQ
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