Gene Dole_1067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1067 
Symbol 
ID5693902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp1261223 
End bp1261831 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content43% 
IMG OID641263663 
ProductTetR family transcriptional regulator 
Protein accessionYP_001528953 
Protein GI158521083 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCACA CTCCGATACA GGAAAAAAGA CGTCGGCAGA TCATGGACGC ACTGACCCGG 
TGCTTATTAA AAAAACCGTT TAATCAGACC TCGATTAAAG ATATTGCTGC TGCCGCCAAA 
ATCAATCACG GTATGCTGCA TTACTATTAT AAAAGTAAAG AAGACATACT CCTTAACTAT 
ATCGAATTTG TCATCGAAGA CTACAAAACC ATTTTTGAAG ATTGGATGGC TTCAAAAACA 
CCTGACTTTA AGGACCCCGA GGATATGCTG CGCGCCTGCC TTGATTTCGC CTACCATCGC 
ATCACTTCAA ACCGTGACCT TTCAAAAATA TTTATCGAGT TTCAGGAACT GGCGATATAC 
AACCCCAAAA TAAAAAAGAA ACTCCGGAAA GCCTATTCCG AGTGGATCGA AACGGTTCAC 
ATCCTTCTTA CCAGAGCCTG CAAGGAGGAA GCATCCGTAC CTCACATCAG CGCGGGACTG 
GTTGCTTTTT CAGAAGGCAT TTCTCTCCTT TCCTTAATCC TTGATAAGGA TGATGCCGAA 
ATAAAAAAGC TGTTCAAGGC GTTCCAGGAA CAGTTTATAC AATATTTCAT GAAGAGCATA 
ACCCAATAG
 
Protein sequence
MAHTPIQEKR RRQIMDALTR CLLKKPFNQT SIKDIAAAAK INHGMLHYYY KSKEDILLNY 
IEFVIEDYKT IFEDWMASKT PDFKDPEDML RACLDFAYHR ITSNRDLSKI FIEFQELAIY 
NPKIKKKLRK AYSEWIETVH ILLTRACKEE ASVPHISAGL VAFSEGISLL SLILDKDDAE 
IKKLFKAFQE QFIQYFMKSI TQ