Gene Dole_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1066 
Symbol 
ID5693901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1260226 
End bp1261083 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content56% 
IMG OID641263662 
Productpyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit 
Protein accessionYP_001528952 
Protein GI158521082 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 
TIGRFAM ID[TIGR02177] 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGATG TAAAAACATA TCAATGCGAT TATGAAAACA AATGGTGTCC GGGCTGCGGC 
AATTTTATGA TTCTCGAAGC CATGAAAATC GCCCTGGCCG GCCTGGATCT GGCCCCGGAA
AAAATTCTGA TCGTGTCCGG CATCGGCCAG GCCGGAAAGA CCCCCCATTT TCTGAAATGC
AATTTTTTCC ATGGCCTGCA TGGACGGGCA TTGCCGGTAG CCACCGGGGC CAAGCTGGCC
AACCATGATC TGACCATCAT CGTCAATTCA GGGGACGGGG ATTGTTACGG CGAAGGCGGC
AACCATTTTT TAAGCGCCAT CCGCCGCAAC CTCGATATCA CCTTGCTGGT CCACGACAAC
AAGGTATACG GGCTGACCAA AGGCCAGTCC TCCCCCACTT CCGACCGGGG CTTTGTTACC
AGCATGCAGC GCCGGGGCGT GCTTTATGAC GCGTTCAACC CCCTGACCGT GGCCCTGGCC
CTGGGCGCCG GTTTTGTGGC CCGTGGCTAT TCCGGCAGCA GGGACAACCT GGTGCGCACC
ATTCAGGCGG CAATCCAGCA CAAAGGTTTC AGCCTGGTGG ATATTCTGCA CCCCTGTGTT
TCCTTTAACC GGGTCAACAC CCACGCCTGG TACAAGGAGC GGTTGGTCGA CCTGTATGAC
AACAGTGAGC ATGATCCGGG CGATAAACAA GCGGCCATGA TTCTGGCGGA ACAAGGGGAT
GCGCCAATAC CCATCGGCAT TCTTTACCGG AAAGAGGCTC CTGCGTTTAC AGACCGTATT
GACCACCTCA AGGAGGGTCC CCTGGTTGAT CGCGCTTATG ATCGCGAGGC GGTGCAATCC
TTGCTGACAG GCGTTTAG
 
Protein sequence
MVDVKTYQCD YENKWCPGCG NFMILEAMKI ALAGLDLAPE KILIVSGIGQ AGKTPHFLKC 
NFFHGLHGRA LPVATGAKLA NHDLTIIVNS GDGDCYGEGG NHFLSAIRRN LDITLLVHDN
KVYGLTKGQS SPTSDRGFVT SMQRRGVLYD AFNPLTVALA LGAGFVARGY SGSRDNLVRT
IQAAIQHKGF SLVDILHPCV SFNRVNTHAW YKERLVDLYD NSEHDPGDKQ AAMILAEQGD
APIPIGILYR KEAPAFTDRI DHLKEGPLVD RAYDREAVQS LLTGV