Gene Dole_1057 details

Gene Information

• Locus tag: Dole_1057
• ID: 5693892
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1250892
• End bp: 1251338
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 641263654
• Product: RpiB/LacA/LacB family sugar-phosphate isomerase
• Protein accession: YP_001528944
• Protein GI: 158521074
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01120] ribose 5-phosphate isomerase B

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0654915
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATCA TCATTGCAAG CGACCATGCC GGTTTCCGGA CAAAAAGGGA CATTATTGAC 
TATCTTCGCC GCAACCATGC CACCTGGGAG GTGACCGACC TGGGGCCGGA AGACGACGCG 
CCGGTGGATT ATCCGATATA CGCCCACATG GTGGCAAGCG CCGTGGCAGC CGGGGACTAC 
CGGCGCGGCA TTCTCATCTG CGGCAGCGGC ATCGGCATGT CCATGATGGC CAACCGGTTC 
CAGGGGGTGC GGGCCGCCCT GTGCGTGACG CCCCAGATGG CCGAACTGAG CCGGCAGCAC 
AACCGGTCCA ACGTGCTGTG CCTGGCCGGT CGGCTGGTGG AGCTGGAGGA AAACATTCAG 
ATCGTCAATA CGTGGCTGAA TACCGACTAT ACGGACGAGG CCCGGCACAC CCGGCGCTAC 
CGGCTGATGG ATCTGCTGCA AAGCTGA 

 

Protein sequence

MNIIIASDHA GFRTKRDIID YLRRNHATWE VTDLGPEDDA PVDYPIYAHM VASAVAAGDY 
RRGILICGSG IGMSMMANRF QGVRAALCVT PQMAELSRQH NRSNVLCLAG RLVELEENIQ 
IVNTWLNTDY TDEARHTRRY RLMDLLQS