| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1053 |
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| Symbol | |
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| ID | 5693888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1241570 |
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| End bp | 1242133 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641263650 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_001528940 |
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| Protein GI | 158521070 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGTTGT CAACCCCCCG GATTCCACCG GCCACACCGG AGGAGATGGG CGAAGAAGCC
ATGTCCCTGC TGGGTCTGCT ATCCGCGAAA TCGGGCCGGG TGGACAATAT TTTTGCCACA
CTGGCCCGTC ACCCGGTGTT TTTGAAAAAT TTTCTGGTGT TCGGCAGCCA TGTGCTGATG
ACCTCCACGT TGCCGCCCAG GGACCGGGAG ATCCTGATCC TGCGCATCGG CTGGCTGTGC
AAGGCCGAAT ACGAATGGGG CCAGCATGTT GAGATCGGCC GGCGCATCGG TCTTTCCGAC
GAGGAGATCG TCCGCATCAC CGCCGGCGCC GACGCGCCGG GATGGAGCGA ACTGGAGGCC
GCCCTGATCC GGGCCACAGA CGAGCTCCAC GGGGACGCAT TCATTCAGGA TGCCACATGG
CATATTCTCA GCCGCCACTA CGACGCCCGG CAGCTCATTG ACCTGGTGTT TACCGTGGGC
CAGTACAACA TGGTCTCCAT GGCCTTGAAT ACCTTTGGCG TGCAACTGGA TGAACGGTTG
TCCGGTTTCC CCGAAACCCC CTGA
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| Protein sequence | MRLSTPRIPP ATPEEMGEEA MSLLGLLSAK SGRVDNIFAT LARHPVFLKN FLVFGSHVLM
TSTLPPRDRE ILILRIGWLC KAEYEWGQHV EIGRRIGLSD EEIVRITAGA DAPGWSELEA
ALIRATDELH GDAFIQDATW HILSRHYDAR QLIDLVFTVG QYNMVSMALN TFGVQLDERL
SGFPETP
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