Gene Dole_1033 details

Gene Information

• Locus tag: Dole_1033
• ID: 5693868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1218951
• End bp: 1219538
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 641263630
• Product: hypothetical protein
• Protein accession: YP_001528920
• Protein GI: 158521050
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAGGCTG CTCTGTTATC CCCCTCCACA CATAACAGTC CGGCGCGACA CCCCGATGGC 
TTCACGCTGA TCGAGCTGAT TGTCGTGTTG GCCCTTCTGG TCATCGTTCT GTCCGTGACC 
TTTCCCCGTG TTTCAAATAT CGGATTTTCA GACAGCAGGA ACAAGACCGC GCGCTGGATT 
ATCACCACCA CCCGGGTCCT CAAGTCAAAA GCGGTCATGG ACCGCCATCC CTACGTGCTT 
CAGGTGGACA CCTCCCGCCA GACATTGACG GCCTTGCCCG GGGCAACTTC GGGCAATCTG 
CCGGCGCAAA TGGCGGCGCT CGCCGGCCAA ACGCCGGAAG CCGACGTCCC CGGCCCGGAG 
ACCACAGGCA CCCGGCGCCT GGCGCTTTCG GATGATCTGA CCGTTGAGCA TGTGATCTTT 
GCCGGCAGTG ATACCGCGCA AACCGGGGTG GTGGATATTG TGTTTCATGC CGGCGGTTAC 
TCGGACTGGG CCGTGATTCA TATGCGGGAC CGGGGCCGGC GGATCTCTTT TATTATTGAG 
CCGTTTATCA ACCGGGTCAG AATGGTGGAC GGGTATGCGG AACTTTGA 

 

Protein sequence

MEAALLSPST HNSPARHPDG FTLIELIVVL ALLVIVLSVT FPRVSNIGFS DSRNKTARWI 
ITTTRVLKSK AVMDRHPYVL QVDTSRQTLT ALPGATSGNL PAQMAALAGQ TPEADVPGPE 
TTGTRRLALS DDLTVEHVIF AGSDTAQTGV VDIVFHAGGY SDWAVIHMRD RGRRISFIIE 
PFINRVRMVD GYAEL