| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1028 |
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| Symbol | |
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| ID | 5693863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1212746 |
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| End bp | 1214875 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641263625 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001528915 |
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| Protein GI | 158521045 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGACA GCACACCCCC ACGGAAGAAA CGCGCAAGGC CGCGGCGAAA AGAGCGCCCC
CCTGTCACCC CGAGCCTTCG AAAAAAAACC GCGGCAAAAA GCAAAAAACC CCGGCGCCCC
GCCCTCAAGC CGGGCAGCGA TCCCCGGCTG AAAAAGGTAT TTGCCGCCAT CGGCGTGCCT
GAACAGGCCC CCTTTTCCCC GGACCCGTTT CAACTGGAGG CCCTGAAAGC GGTGCGGACA
TCGGACTGCA TCGTCACAGC GCCCACCGGC GCTGGAAAAA CGTGGATTGC CGAGCAGGTG
ATTGCCGCCA TGCGGAAAGA GGGCAAAAAG ACATGGTACG CCTCACCGCT CAAGGCCCTG
AGCAACTCCA TCTACGAACT CTTTTCCGGC ATGTTCGGAC CGGAAAATAC CGGCATCCTT
ACCGGGGACC GAAAAGAAAA TCCCAATGCC CCCATCATCG TCGGCACCAC CGAAATCCTG
CGCAACCAGC TTTACGACTC CATGTACAGC GGCGACGACC TGGACACCGA CTTTGTCATT
CTGGACGAGG CCCATTTCCT GGGAGACGAG GATCGGGGCG TGGTGTGGGA AGAGACCATG
ATCTACCTGC CCCGGCGCAT TCCCATCCTG ATGCTGTCCG CCACCATCGG CAACCCGGAC
CAGATTGCCG CATGGCTTTC CACCATAAGA CAAAGGCCCT GCCGGGTGGT AAAAGAGACC
AACCGGCCGG TGCAGCTTTA CCCTCTCTTT CTGCATCCTT CCGGCACGCT CTTTCCCCTG
CTGCGCGAAT CCTCCGGGAC CGGCCCCCGG GGCCTGTACA AGCGAATGAA TGATTTTATC
AAGGCCCGGG TCCAGCTGGC GCCGGCCCAC CGGCTGCCGC CCGTAAACGA AATTTTAAAT
GTGCTGCGCA AGTACAACCT GCTGCCCGCC ATCTTCTTCA TGAAGTCCAG GGCCGACTGC
GACAAGGCCC TTGATCTGTG CGACGACCAG AACAGGGCCG TTGATCCGGA GCGGTGGCGC
TGGCTGGAGG AGCGCATCGA CCGAATGGTG GCCGCCACCC CTTACCTGGC AGGCCACAAA
CAGCTTTTGC TGATCCGGGA CCGGGCCGTG GCGGCCCATC ACAGCGGTCA CCTGCCCGTA
TGGAAAAAAG CGGTGGAAAC CTTCATGAAC GAAGGGCTTC TGGACGCGGT GTTTGCCACC
TCCACGGTGG CGGCCGGGGT CAACTTTCCG GCCCGCAGCG TGGTGATTCT CAATTCCGAC
CGGTTCAACG GCAAGGATTT TCTGCCCCTT TCTTCCATCG AGTTTCACCA GATGACCGGC
CGGGCCGGCC GCCGGGGCAA GGACAACATC GGTTTTGCCG TAATGGTGCC GGGCAAGTTC
ATGGACTTAA AACACGTGGC CCAGGTGGCC GATGCCCCGG CGTCGGATAT CTACAGCCAG
ATCAAGATTA ATTTTTCCAT GGTGCTCAAC CTGCTCCTGA GCCACACCCC GGACCAGGTC
AAGACATTGC TGAACCAGTC CTTTGCCCTG TTTCAACGCA CCCAGAGGGG CATGGCCGCC
GATAACGTTC TCTGGGACGA TTTTATCCGT CACCTGGACT TTCTCAAGGA TACCGGGTTT
GCCGATGAAG CGGGCCGCCT CACCGACGAC GGCATATGGG CCTCCAACCT GCGGGTGGAC
CACCCCCTGA TGATTGCCGA AGGATTCCGG CTCTCGTTGT TCCCGGAAGA CGACCCGGCC
CTGCTGGCAG CGGTGGTGGC CGCCTTTGTC AACGAACGCC AGGTGGTGGA CAGCCCGGCC
GTGGAGCACG CCGCGCCCAA GTCCCTGCGC CGGGTGTTCA ACAGCCTGAA ACACGCCATG
ACGCCCTTTA CCCGGCACAT GAAAAAAAGA GGATTTGAAC CCACTGATCT CTTCCTGGCG
CCGGCGGTAA CCATGCACCA GTGGGCCACG GACATGGACT GGGAGGATGT GGTGTTCCGG
ACCGGCAGTG AGGAGGGGGA TCTGGCCAAC CTTGTTTTCC GGGCCGCGGA CAACCTTCGC
CACATCGCCA CCCTGACCGA CATCTTTCCC CGGGCCGCGC AGAGCGCCAG GGAGGGCGTT
GATCTGATTG TTCGGGAGCC GCTGGTATAA
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| Protein sequence | MTDSTPPRKK RARPRRKERP PVTPSLRKKT AAKSKKPRRP ALKPGSDPRL KKVFAAIGVP
EQAPFSPDPF QLEALKAVRT SDCIVTAPTG AGKTWIAEQV IAAMRKEGKK TWYASPLKAL
SNSIYELFSG MFGPENTGIL TGDRKENPNA PIIVGTTEIL RNQLYDSMYS GDDLDTDFVI
LDEAHFLGDE DRGVVWEETM IYLPRRIPIL MLSATIGNPD QIAAWLSTIR QRPCRVVKET
NRPVQLYPLF LHPSGTLFPL LRESSGTGPR GLYKRMNDFI KARVQLAPAH RLPPVNEILN
VLRKYNLLPA IFFMKSRADC DKALDLCDDQ NRAVDPERWR WLEERIDRMV AATPYLAGHK
QLLLIRDRAV AAHHSGHLPV WKKAVETFMN EGLLDAVFAT STVAAGVNFP ARSVVILNSD
RFNGKDFLPL SSIEFHQMTG RAGRRGKDNI GFAVMVPGKF MDLKHVAQVA DAPASDIYSQ
IKINFSMVLN LLLSHTPDQV KTLLNQSFAL FQRTQRGMAA DNVLWDDFIR HLDFLKDTGF
ADEAGRLTDD GIWASNLRVD HPLMIAEGFR LSLFPEDDPA LLAAVVAAFV NERQVVDSPA
VEHAAPKSLR RVFNSLKHAM TPFTRHMKKR GFEPTDLFLA PAVTMHQWAT DMDWEDVVFR
TGSEEGDLAN LVFRAADNLR HIATLTDIFP RAAQSAREGV DLIVREPLV
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