Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1020 |
Symbol | |
ID | 5693855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1199923 |
End bp | 1201263 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641263617 |
Product | anaerobic glycerol-3-phosphate dehydrogenase subunit B |
Protein accession | YP_001528907 |
Protein GI | 158521037 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3075] Anaerobic glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | [TIGR03378] glycerol-3-phosphate dehydrogenase, anaerobic, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTGA ATAACAGCAC CGACTACGAC TGCCTGATCA TCGGTGGCGG CCTGTCAGGT CTTGCCTGCG GCATCACCTG CCTTGCCGAA GGGCTTTCCT GCGCCATTCT CTCCTCGGGC ATGAGCGCCC TGCACTTTTC ATCCGGCTCT GTGGACCTGC TGGGATATTT TCCGGAAGCC ACCGTTGTGC CCGACCCCTT TGACGCCCTG CCCCGGTTTA TCGACATGCA TTCGGAACAC CCCTACGCGC GGTGCGGCAT CGACACCATA AAAGAGGCCC TGGCCTTTTT CAGGCAGGAA ATGGCCAGAG CCGGGCTGCC CCTCCATGAG AACTGTTCCC GCAACCACTT TCACGTCACG GCCCTGGGCA CGCTGAAGCC CACCTTCTTT TCCCAGCGAA GCGTTTTCAA CCAGGAGATA CGGTCGGTCA TCGACCACAC CCCGGCCATT ACCATCATGA ACATTCAGGG TTTTCGGGAC TTTCATCCCG GCCTGGCCGC AGCCAACCTC AAACGGCACA AGCTGTTTTC CGCCTGCGAC ATTCAGTGCG CCGAGATGCA TCTGCCGGAA AAGGAGAAAA ACCCTTCACC GGTCCACGCC ATGCGCTCCA TCGACATCGC CCGGATATTT GACACCATGG ACCCGGATGA AATGGCCCGT CTTATCAGAA CGGCCTGCCC GGACGCCGAT ATCGTGGGGC TTCCGGCGGT GCTGGGAATT GAACGCCACA ACGCGGTGCT GGACCGGCTG CGCCAAAAAA CCGGGAAAAT CATTTACGAA GTACCCACCC TTCCCCCCTC CATGCCGGGC ATGCGGCTGG ACAATGCGCT CAAGTCCCGG TTCGCGGCCA TGGGCGGTGT CTTTATCCAG CGGGAAACCG TGGAAAAGGG GACCATCGCC AACGGCCGTG TAACCGCCAT CCGCACAAAA AACCAAAACG ACACCCTTAC AGCGGGGTTT TATGTGCTGT CCACCGGCAG TTTCTTTTCA GGAGGCCTTG TCAGCCGGTT TGATCAAATC GCGGAGCCGG TCTTCAACCT GGCCCTGGCC CGGTCGCCTG AAGCCCGCTG CCTGGGATCG GAAAACTTTT TTGCCCCTGG GGGGCATGCG TTTCTTTCCG CCGGGGTCAT CACGGATGAC ACGTTCCATC CGAAGACCCC GGCGGGAGAG ACCGTGGAAA ACCTTTTCTG CACGGGTGCG GTGCTGTCCG GCTACGACCC GGTCAACCAG GGGTGCGGCG GCGGCGTGGC CGTTGCCACC GGCTATGTGA CGGGCCGGCG CATCGCCCGG GGCATCTATT CGGCCACCCG CCAGCGCCAG GACTATCCGG ATTTGCCATG A
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Protein sequence | MNLNNSTDYD CLIIGGGLSG LACGITCLAE GLSCAILSSG MSALHFSSGS VDLLGYFPEA TVVPDPFDAL PRFIDMHSEH PYARCGIDTI KEALAFFRQE MARAGLPLHE NCSRNHFHVT ALGTLKPTFF SQRSVFNQEI RSVIDHTPAI TIMNIQGFRD FHPGLAAANL KRHKLFSACD IQCAEMHLPE KEKNPSPVHA MRSIDIARIF DTMDPDEMAR LIRTACPDAD IVGLPAVLGI ERHNAVLDRL RQKTGKIIYE VPTLPPSMPG MRLDNALKSR FAAMGGVFIQ RETVEKGTIA NGRVTAIRTK NQNDTLTAGF YVLSTGSFFS GGLVSRFDQI AEPVFNLALA RSPEARCLGS ENFFAPGGHA FLSAGVITDD TFHPKTPAGE TVENLFCTGA VLSGYDPVNQ GCGGGVAVAT GYVTGRRIAR GIYSATRQRQ DYPDLP
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