Gene Dole_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1014 
Symbol 
ID5693849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1193509 
End bp1194156 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content60% 
IMG OID641263611 
ProductABC-type transport system auxiliary component-like protein 
Protein accessionYP_001528901 
Protein GI158521031 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTCC GTCACATCCC GTTTGCGCGA TGCCTTGTTT TCGGGGCACT GACCCTGGTA 
GCCGCCGGCT GCATCAACCT GTCGAGCCTG ACCCAGCCTC CTATACAGAC CGCCTACTAC
ATTCTGGAAT ACGATCCCCC GGCACCCACC GGCAGCAAAC CGTCGGCACC GGCGATCCGC
GTGGACCGGT TCTCCGCCGA TCCCCTCTAC GCCACCACCG CCATGATCTA CAAAAAACAA
CCTTTCCAGA CCGACGCCTA CGTGTATCAC CGGTGGCACA CGGCGCCGGC CGACATGGTA
AGCCACCTGC TGGCAAGAGA CCTGAGGCGG TCCGGAAATT TCGCCGCTGT TTTCGGCCCG
GCTGCTCCCG CTTCAGCGGC TTATGACATC AAGGGTCACG TCGAAATCTT TCTGGAAAAC
GATACCGCCG ATCCCTGGCA GGCCGAACTC CTGCTGACTG TCACGGTGAC CGGGCCACCC
GGCACCGGCA ATAGCGCCGT TGTACTTCAA AAAAGTTACC AGGCGTCGGC ACCCTGTGTG
CGCAACCATC CCCGGGCCTT TGCCGAAGCC ATGAGCCGGG CCATGCAACT GCTCTCCGAA
GAAATTATTG CCGATGTGTG CCGGATTGTT GAAACCGGGG AGAAATGA
 
Protein sequence
MNVRHIPFAR CLVFGALTLV AAGCINLSSL TQPPIQTAYY ILEYDPPAPT GSKPSAPAIR 
VDRFSADPLY ATTAMIYKKQ PFQTDAYVYH RWHTAPADMV SHLLARDLRR SGNFAAVFGP
AAPASAAYDI KGHVEIFLEN DTADPWQAEL LLTVTVTGPP GTGNSAVVLQ KSYQASAPCV
RNHPRAFAEA MSRAMQLLSE EIIADVCRIV ETGEK