Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1014 |
Symbol | |
ID | 5693849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1193509 |
End bp | 1194156 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641263611 |
Product | ABC-type transport system auxiliary component-like protein |
Protein accession | YP_001528901 |
Protein GI | 158521031 |
COG category | [R] General function prediction only |
COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTCC GTCACATCCC GTTTGCGCGA TGCCTTGTTT TCGGGGCACT GACCCTGGTA GCCGCCGGCT GCATCAACCT GTCGAGCCTG ACCCAGCCTC CTATACAGAC CGCCTACTAC ATTCTGGAAT ACGATCCCCC GGCACCCACC GGCAGCAAAC CGTCGGCACC GGCGATCCGC GTGGACCGGT TCTCCGCCGA TCCCCTCTAC GCCACCACCG CCATGATCTA CAAAAAACAA CCTTTCCAGA CCGACGCCTA CGTGTATCAC CGGTGGCACA CGGCGCCGGC CGACATGGTA AGCCACCTGC TGGCAAGAGA CCTGAGGCGG TCCGGAAATT TCGCCGCTGT TTTCGGCCCG GCTGCTCCCG CTTCAGCGGC TTATGACATC AAGGGTCACG TCGAAATCTT TCTGGAAAAC GATACCGCCG ATCCCTGGCA GGCCGAACTC CTGCTGACTG TCACGGTGAC CGGGCCACCC GGCACCGGCA ATAGCGCCGT TGTACTTCAA AAAAGTTACC AGGCGTCGGC ACCCTGTGTG CGCAACCATC CCCGGGCCTT TGCCGAAGCC ATGAGCCGGG CCATGCAACT GCTCTCCGAA GAAATTATTG CCGATGTGTG CCGGATTGTT GAAACCGGGG AGAAATGA
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Protein sequence | MNVRHIPFAR CLVFGALTLV AAGCINLSSL TQPPIQTAYY ILEYDPPAPT GSKPSAPAIR VDRFSADPLY ATTAMIYKKQ PFQTDAYVYH RWHTAPADMV SHLLARDLRR SGNFAAVFGP AAPASAAYDI KGHVEIFLEN DTADPWQAEL LLTVTVTGPP GTGNSAVVLQ KSYQASAPCV RNHPRAFAEA MSRAMQLLSE EIIADVCRIV ETGEK
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