Gene Dole_1012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1012 
Symbol 
ID5693847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand+ 
Start bp1190935 
End bp1191498 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content54% 
IMG OID641263609 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001528899 
Protein GI158521029 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTTG TTGACACGGA TATCACCGGG GTGCGTATCA TTGAGCCGGA TGTTTTTGAG 
GATGCGCGCG GGTTTTTCAT GGAGACCTAC CAGCGGCAGC GATATGCGGG ATACGGAGTG 
GATGTGGATT TTGTTCAGGA CAACCTCTCC TTCTCTTCAG CAGGCACATT GCGGGGGCTG 
CACTACCAGT ATCCTTTTGC CCAGGAAAAA CTGGTCCATG TCATATCCGG CGAAATTTAT 
GATGTGGCCG TGGATGTGCG GCGCGGCTCT CCCACCTTTG GCCGGTGGGT GGGAACGGCA 
CTTTCATCTG CCAACCGGCG GCAGTTTTTT ATTCCAAAGG GCTTTGCCCA TGGTTTTTTG 
GTAGTAAGCG ACACGGCTCT AGTGACCTAT AAATGCGGCG ATTATTACCA TCCCGAGGCG 
GACCGGACCC TGCGCTGGGA TGACCCGGCA CTTATCATCG ACTGGGGAAC AAAAACGCCT 
CTGCTGTCGC CAAAGGATGC GGCGGCGCCG AGTCTGAAGG ATATTCCTTC AGGCTACTTG 
CCTGTATACG GTGAGTTTAA ATAA
 
Protein sequence
MRVVDTDITG VRIIEPDVFE DARGFFMETY QRQRYAGYGV DVDFVQDNLS FSSAGTLRGL 
HYQYPFAQEK LVHVISGEIY DVAVDVRRGS PTFGRWVGTA LSSANRRQFF IPKGFAHGFL 
VVSDTALVTY KCGDYYHPEA DRTLRWDDPA LIIDWGTKTP LLSPKDAAAP SLKDIPSGYL 
PVYGEFK