| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1006 |
|---|
| Symbol | |
|---|
| ID | 5693841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1183981 |
|---|
| End bp | 1185243 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641263603 |
|---|
| Product | Fe-S oxidoreductase-like protein |
|---|
| Protein accession | YP_001528893 |
|---|
| Protein GI | 158521023 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000451479 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGCAG GTGGCCGCCG GCCATGCCTG TTGTCTTATT TGCCATCTCC TGCTAAAGGT
GAATCTGAAG ATCAGGGACG CTTTAATAAA AGGAGAACAG AAATGGCATA CATTGACCGA
TGTGACTGGA GCCGATGCAC CGAGTGCGGA CAGTGCCTGA TGCAGTGCCC GGTGCTGGAA
ATGGACAAGC CGGCCGCGGT GAGTGCGATC CGCAACCTGA TTTCCGGCGC GCCTGCGCCT
GATGTGTTTG AAAAGTGCAC CTTCTGTTTC AACTGCAACC GGTACTGCCC GGTGGAGGGA
CTGCGACCCC ACGAGCTGAT TCTGCAGCGG GCACTGGAGC ACCGGGGAAA GGTGCCGGGT
ATTCTGAAAT ACCTGGCCAA CGGGCGGGGC CGGACCAACC TGTTTTCCGA TATGTATGAA
AAGTTCACTG CCGAAGAAAA ACAGATTCTT GAAAAATGGT CTGTGGTTCC CGAACAAAAA
GAGATCCTGT GGATCGGGTG CATGGGCAAG CTCAGCTGCC GGGACATCGA GCACTCCACG
GTGCTCGCGC CCCTGGCCAA GTTCGGCCCG CCTGACCTGT GCTGCGGTGA GCTGGCCTAC
CGGCTCTGCT CCTGGGAGAT GTATGAGCAG ACCGCCCAGC GCACCCTTGA AGTCTTTTCA
AAGCTCAACA TCGACCGCAT GGTCTGCTAC TGCGGCTCCT GCTACAACTA TTTTTCCAGT
ATTCTTCCCA AAGTTTATGG CGTAACCCTG CCTTTTAAAA TTATCTCCAT GTACCAGTGG
CTGTGGGAGC GGTTTGAAAA GGGGGAGCTG CGGGTGACCG CGCCCCGTGC CTTTACAGCC
GCCATCCATG AATCGTGTTA TGTCACCGAG CTGGAAGACG ATTTTGCCGA CTGCTTGAGA
CGGCTTTATC ACACGGCCGG TGTGGAGACC GTGGAGCTGG CCCATCACGG TGACTGCAAC
CTGTCCTGCG GAGCGGTGAG TGCCGTACGC AGCCTCAATG TGTTATCCAG CATTTTTAAG
GAGCAGCGCA GAAAATACGG TGAGGTGTCG GATGCAGGGG CCTCCCAGAT CGCGGTCAAC
TGCCCGGGCT GTTACGTGAC CTTAAGCTTT TCCAACTGGC TGTTCGGCAA GAAACTGCGG
TACATGCCCG ACGAACTGCT GGCCGCTTTC GGTGACACCA TCACCACGCC CCTGGGAAAG
CGGATGCCCA TGATCATGAC CACCGCGGCC CGGCGGTTTC CCGGGCTGAT GTTTTCCCGG
TAA
|
|---|
| Protein sequence | MGAGGRRPCL LSYLPSPAKG ESEDQGRFNK RRTEMAYIDR CDWSRCTECG QCLMQCPVLE
MDKPAAVSAI RNLISGAPAP DVFEKCTFCF NCNRYCPVEG LRPHELILQR ALEHRGKVPG
ILKYLANGRG RTNLFSDMYE KFTAEEKQIL EKWSVVPEQK EILWIGCMGK LSCRDIEHST
VLAPLAKFGP PDLCCGELAY RLCSWEMYEQ TAQRTLEVFS KLNIDRMVCY CGSCYNYFSS
ILPKVYGVTL PFKIISMYQW LWERFEKGEL RVTAPRAFTA AIHESCYVTE LEDDFADCLR
RLYHTAGVET VELAHHGDCN LSCGAVSAVR SLNVLSSIFK EQRRKYGEVS DAGASQIAVN
CPGCYVTLSF SNWLFGKKLR YMPDELLAAF GDTITTPLGK RMPMIMTTAA RRFPGLMFSR
|
|---|
| |