Gene Dole_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0999 
Symbol 
ID5693834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1171930 
End bp1173201 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content56% 
IMG OID641263596 
Productheterodisulfide reductase, subunit A (HdrA) 
Protein accessionYP_001528886 
Protein GI158521016 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACAG ATAATTCGAC CTCTGCCAAC GGAAGCATCA TGGTGGTCGG AGGAGGCATC 
AGTGGTCTGA CTACCGCCCT TGAGGCTGCC GAGGTGGGTT ACGAGGTGTT CCTCATTGAA
AAGGAACCTT ACCTGGGCGG ACGCGTGGCG CAGCTGAACC AGTATTTTCC CAAGCTGTGT
CCTCCGTCCT GCGGTCTTGA GATCAACTAT CGGCGGATCA AGGACAACCG GAACATTCGT
ACGTACACGA TGGCCGAAGT GGAAAAGGTG GAGGGCGGCC CGGGCAACTA CAAGGTCTCT
ATCCAGCTCA ACCCCCGGTT CGTGAACGAG AACTGCACGG CATGCGGCGA TTGCGTGGCG
GTCTGTCCGG CGGAGCGCAG CAACAACTTC AATTTCGGCA TGGACAAGAA CAAGGCGATT
TTCAAGTCCA CGGACATGGT CTTCCCCATG CGCTATGCCA TTGACGGCGC CGCCTGCAAG
GGAACCGCCT GCAACAAGTG CGTGGAGGTA TGCCAGTACA ACGCCATTGA GTTGGACATG
AAGCCCAAGG TCATCGAGCT TCAGGTGGGG TCTATTGTAT GGGCCACCGG CTGGGAGCCC
TATGACGCCA CCAAAATCGA CACCCTGGGG TTTGGAAAAT ACAAGAACAT CATCACCAAC
ATGATGCTGG AGCGGCTGGC TTCCCCCAAC GGACCCACAC AGGGCAAAAT TGTCCGGCCG
TCGGATGAAA AGGCGCCTGA GAGCGTCGCT TTTGTTCAGT GCGCCGGCTC CAGGGACGAA
AACCACCTGC CCTACTGTTC TTATATCTGC TGCATGGCTT CCCTGAAACA CGCCACCTAT
ATTCGGGAGC GGTATCCGGA AGCCAAAGTC TACATTTTTT ATATTGATCT CCGTACACCG
GGCTACCGGT ACGAGAAGTT CTACAACACG ATCAAGGAAG ATCCCAACAT CTTTTTTATC
AAAGGCAAGG TGGCCGAGGT AAAAGAGGCG GCCGGATCCA ACATCACGGT GGTGGCGGAG
AACGCCGTGA CCGGCGAAAA GACGGAACAG ACCGTGGACA TGGTCGTACT GGCCACGGGT
ATGCAGCCCA CTGCCGCCAG GCAGAAGCTG CCGGCCGATC TGCAGTACAA CGAAGACGGG
TTTGTTCTCA ATGATTTTGA CAAGGGCGGC ATGTTTGCCG CCGGGTGTGC CAACAAACCG
CTGGACGTGG TGTCGTCCAA CCAGAATGCA ACGGGCATGG CACTGAAGGC AATTCAAACT
CTGAAGAGGT AG
 
Protein sequence
MATDNSTSAN GSIMVVGGGI SGLTTALEAA EVGYEVFLIE KEPYLGGRVA QLNQYFPKLC 
PPSCGLEINY RRIKDNRNIR TYTMAEVEKV EGGPGNYKVS IQLNPRFVNE NCTACGDCVA
VCPAERSNNF NFGMDKNKAI FKSTDMVFPM RYAIDGAACK GTACNKCVEV CQYNAIELDM
KPKVIELQVG SIVWATGWEP YDATKIDTLG FGKYKNIITN MMLERLASPN GPTQGKIVRP
SDEKAPESVA FVQCAGSRDE NHLPYCSYIC CMASLKHATY IRERYPEAKV YIFYIDLRTP
GYRYEKFYNT IKEDPNIFFI KGKVAEVKEA AGSNITVVAE NAVTGEKTEQ TVDMVVLATG
MQPTAARQKL PADLQYNEDG FVLNDFDKGG MFAAGCANKP LDVVSSNQNA TGMALKAIQT
LKR