| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0980 |
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| Symbol | |
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| ID | 5693815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1141452 |
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| End bp | 1145375 |
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| Gene Length | 3924 bp |
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| Protein Length | 1307 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641263577 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_001528867 |
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| Protein GI | 158520997 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACAA ATTCAATAAA AGCCGCTTAC CGTCTGGCAA ATCAGGCCCT GCGGGTTGAC
CGGCAGTATG CGCTGCGCCG GCTTTCCGCC ATTTCCGGCG GCAGGCGGCC CCTGTCCGGC
CCGGCCCTGG AAAGGGAGGT TTCCCAGCTG ATTGCCCGGC TGGAGGGATC AGTGGCCCTT
CGTGCTTTCC GGTATGACCG CTTTCCCCGG CTCCCCTCGG ACCCTGCCCT GCCCATTGCC
CCCCGCCAGG ATGAAATCAT CGCCGCGATT CAGAAACATC CGGTGGTGAT TGTTTCCGGG
GCCACCGGGT CGGGCAAGAC CACCCAGATT CCCCGGTACT GCGTGGCTGC CGGATGCGGC
AGGGACGGTC GCATCGGCTG CACCCAGCCC CGGCGCATCG CGGCGGTGTC CGTAGCCGCC
AGAATCGCCG ACGAACTGGG AACGGCATCA ACGGGCCTGG TGGGTCACAA GATCCGGTTT
TCCGATACAA CGGCCGGTAC TCACCTGATC AAGATCATGA CCGACGGCAT TCTTCTGGCC
GAGGCCCAGC GGGACCGCTA TTTAAATGAG TATGACGCCA TTGTGGTGGA CGAGGCCCAT
GAGCGGAGCC TGAACATCGA CTTTATTCTG GGCATTCTCA AACAGGTGCT GGCAAAGCGG
GACGACCTGC GGGTGGTAAT CACGTCGGCC ACCATTGACA CGGAAAAGTT TTCAGCGGCT
TTTGATCAGG CCCCGGTGAT AGAGGTGTCG GGCCGCATGT ATCCCGTGGA GATAAAATAC
ACGCCCCCGG AACCGGAATT CGGCAACGGC GAGCCCCCTA CCTACGTGGA ACTGGCCGTG
GCCGAAGTGG AGCGCGTCTG CAGGCGCAGC CCCTTCGGTG ATATTCTGGT GTTCATGCCC
ACGGCCCAGG ACATACGGGA GACCTGCGAC ATGATCGAGG GCCGCCGCAT GCCCGGCGCA
ACCGTGATGC CCCTTTTTGC CCGGCTTTCC GGTGCGGACC AGGCCCGGGT TTTTTCCAGG
CCCCCGGGCC GGAAAATCAT CGTGGCCACC AACATCGCCG AAACATCCAT TACCATTCCC
GGTATCCGGT ACGTGGTGGA CACCGGCCTT GCCCGCATAT CCTATTACAA TCCCCGTACC
CGCACCACAT CGCTGTCGGT GCGGTCCATA TCACAAAGCA GTTGCCAGCA GCGGGCCGGG
CGCTGCGGGC GCGTGGAAAA CGGTGTATGC GTACGTCTCT ATGACCAGAA GGATTTTGAA
TCCCGCCACC TGTTCACCCC ACCCGAGGTT CTGCGGGCCA ACCTGGCCGA GGTGGTACTG
CGCATGATGG CCCTGAAGCT GGGCACGCCG GACACTTTCC CCTTTGTGGA CCGGCCCGCG
GACAGGAGCA TTCGGGACGG GTATGACACC CTGGTGGAAC TGGGCGCCAT TCAAGCCGTC
AGCCGGGGCG GCTACCGATT GACCGAAACC GGCCGGCTCA TGGCAAAGAT CCCGGCAGAC
CCCCGGCTGG CCCGCATTCT GATTGAGGCC GGGAAAAACG GCTGCCTGGA ACCGGCCGTT
GTCGTGGTGT CGGCCCTGAG CATGCAGGAC CCCAGGGAGA CACCGGCGGA AAGGCTCAAG
GAGGCCCGGG CCGCCCATGC CGCCTTTGCC CACCCGGCCT CTGATTTTAT CACCCTGCTT
AACATATGGG AGGCGTGCCG GGATAAAGGT ACCGGGCAAC TGAAGCGGTT CTGCCGGGAC
CATTTTCTGT CGTTCCGGCG TATGCGGGAG TGGCGGGACC TGTATGCCCA GATGCAGCAA
ATCGCAAAGG AACATGGACT GGGAACCGGC CTCGCCGCCA TCGACCGTCA TCAGGACCCG
GACGGTTTTT ACGCGGCTTT TCACAGGACC CTGCTTTCCG GATACCTTTC CAACATCGCC
GAGAAAAAGG AAAAAAACAT ATACAATGGC GCCGGTGGAA AAACGATGAT GATCTTTCCC
GGTTCGGCCC TGTTCAATAC CGAGCCGTCC ATGATCATGG CCGCTGAACT GGTGGAGACA
TCCCGGCTCT ATGCCCGGAC CGTGGCCGCT ATTGACCGGC AATGGATTCG TCCCCTGGCA
GGAGACCTGT GCCGGGAAAC CTATCTTGCC CCCCGGTGGC GCAGAAGCCG GGAGGAGGTG
GTGGCTGACT GCCGAACCAC CCTTTTCGGC CTGACAGTGG ACTTTCGGGA GTCGGTTTCC
TACGGCCGTG TGGACCCGGC CGGTGCCGCC GATATTTTTA TCCGCAGCGC CCTGGTAAAT
GGTGACGTGA AACAGCCCCT TTCCTTCATG GCCCACAACA CGAGGCTCAT CGAAGAGGGC
GTGGAGATTG AAAATCGCCT GCGGCGGAAA ACCTTTCTGG CCGGGGATGA CGACCTGTTC
GCCTTTTATC GCCAGCGGCT GGACAACGAT GTGTACAGCA TGCGCACCTT AAAGAAACGC
ATCGCGGAAC AGGGGGTCGA TTTTCTGAAG ATGTCGCGGG CCGATGTGAT TAAAGAAGAG
CCGGACCCAG AGGAGATGGC CGGTTTTCCG GACACCCTTC ACCTGGGCCG GGAACAGTTT
GCCTGTCTGT ACGCCTTTGA CCCGGCAAAA GATGAAGACG GCGTCACGGT TCGGATACCG
GCGCACCGGG CGCCGGACGT GGATCCGGAC CATCTGGACT GGCTGGTCCC CGGACTGCTG
ACGGAAAAGA TAGCGGCCCT GGTCAAGGGG CTTCCCAAGG CCTATCGGAA ACAGCTGGTG
CCCATCAGCC GCACCGTGGA GATCATCACA ACGGAAATGC CACAAAGGAA GCGGCCCCTG
GTCTCGGCCC TCTCCCTGTT CATCCGCAAG CGGTTTGGCG TTGAGGTTCC CGCTTCGGCG
TGGCAGCCGG AAAAACTGCC TGAACACCTT CATGCCCGTA TTGCTATTAC GGATGAACGT
AACCGGGAGA TCGAGGTCTC CCGTAACCGT GACATTCTGC GACAGTCCTT TGACCAGGGG
CTGCCGGCGG ATAGCCTGGC GCCCCTGAAA AGGCAATGGG AAAAGACCGG ATGCCGAACC
TGGGAATTTG GTGATCTGCC GGAAGAGATC GTGGCCGATG CCGGAAAGAG GCATATCCGC
CTTTTTCCCG GCCTTGTGGA CCGGACCGGC CACGTGGACC TGCGCCTGTT TGAAAGCCGG
TCCAAGGCCC TTGCCGCCCA TGTCCAGGGC GTGAAAAGAC TCCTGCTGCT GGCGCTTTCC
AGGGAGGTCC GTTTTCTGGG CAGGGATGTG GCCCTGTCAA AACAGGCGGC CTTGAAGGCA
GTGCTGCTGG GCGGGGCAAA GTCCCTTGAA CAGCGGATGC AACAGAAGGT GGCCGACAAC
CTGCTGGCCG TCAGCATTCG AACCGCAGCG GAATTCGAGG CCCTTGCGAT TGAAGTGCCC
GGCCGGCTTT ACGAAAGGGC ACATCAGCTG CGGACGGCCG TGGAAACGGT GGTCGGCGCG
TACCATGACG CACGGCGGCA GATTCAAACG CTTGTCGCGT CACAGCGGGC CGGCGGAGAC
ACCGCCCTTG TGCTGAAGAC CATCGAGGCC GACCTGGCGA CCCTGGTGCC CGAAACCTTT
GTGACGATCT ATCATATTGC CGACCTGGAG CGGTTGCCCC GGTATATGCA GGCCGCTGTC
ATTCGAGCCC GCCGGGCCGT GGAAAACCTC GCCGGAGACC GGCAAAAAGC CGAAAAGGTG
GCCTGGTCAT GTGCCGTTCT CGACCGTTTG GTGGCTGAGC TTCTGCCCGA TACTTCCGAT
GAGAAGCGCC GGGCCGTGGA AGATTTTTTC TGGATGGTGG AGGAATATAA GGTGTCGGTC
TTTGCCCAGG AGTTGAAAAC CGCTTTCCCC GTCTCCAAAA AGAGACTGGA GGAGAACCTT
CGCGAAATTG AGGGAATGGT GTGA
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| Protein sequence | MFTNSIKAAY RLANQALRVD RQYALRRLSA ISGGRRPLSG PALEREVSQL IARLEGSVAL
RAFRYDRFPR LPSDPALPIA PRQDEIIAAI QKHPVVIVSG ATGSGKTTQI PRYCVAAGCG
RDGRIGCTQP RRIAAVSVAA RIADELGTAS TGLVGHKIRF SDTTAGTHLI KIMTDGILLA
EAQRDRYLNE YDAIVVDEAH ERSLNIDFIL GILKQVLAKR DDLRVVITSA TIDTEKFSAA
FDQAPVIEVS GRMYPVEIKY TPPEPEFGNG EPPTYVELAV AEVERVCRRS PFGDILVFMP
TAQDIRETCD MIEGRRMPGA TVMPLFARLS GADQARVFSR PPGRKIIVAT NIAETSITIP
GIRYVVDTGL ARISYYNPRT RTTSLSVRSI SQSSCQQRAG RCGRVENGVC VRLYDQKDFE
SRHLFTPPEV LRANLAEVVL RMMALKLGTP DTFPFVDRPA DRSIRDGYDT LVELGAIQAV
SRGGYRLTET GRLMAKIPAD PRLARILIEA GKNGCLEPAV VVVSALSMQD PRETPAERLK
EARAAHAAFA HPASDFITLL NIWEACRDKG TGQLKRFCRD HFLSFRRMRE WRDLYAQMQQ
IAKEHGLGTG LAAIDRHQDP DGFYAAFHRT LLSGYLSNIA EKKEKNIYNG AGGKTMMIFP
GSALFNTEPS MIMAAELVET SRLYARTVAA IDRQWIRPLA GDLCRETYLA PRWRRSREEV
VADCRTTLFG LTVDFRESVS YGRVDPAGAA DIFIRSALVN GDVKQPLSFM AHNTRLIEEG
VEIENRLRRK TFLAGDDDLF AFYRQRLDND VYSMRTLKKR IAEQGVDFLK MSRADVIKEE
PDPEEMAGFP DTLHLGREQF ACLYAFDPAK DEDGVTVRIP AHRAPDVDPD HLDWLVPGLL
TEKIAALVKG LPKAYRKQLV PISRTVEIIT TEMPQRKRPL VSALSLFIRK RFGVEVPASA
WQPEKLPEHL HARIAITDER NREIEVSRNR DILRQSFDQG LPADSLAPLK RQWEKTGCRT
WEFGDLPEEI VADAGKRHIR LFPGLVDRTG HVDLRLFESR SKALAAHVQG VKRLLLLALS
REVRFLGRDV ALSKQAALKA VLLGGAKSLE QRMQQKVADN LLAVSIRTAA EFEALAIEVP
GRLYERAHQL RTAVETVVGA YHDARRQIQT LVASQRAGGD TALVLKTIEA DLATLVPETF
VTIYHIADLE RLPRYMQAAV IRARRAVENL AGDRQKAEKV AWSCAVLDRL VAELLPDTSD
EKRRAVEDFF WMVEEYKVSV FAQELKTAFP VSKKRLEENL REIEGMV
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