Gene Dole_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0979 
Symbol 
ID5693814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1140815 
End bp1141438 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content60% 
IMG OID641263576 
Productnuclear protein SET 
Protein accessionYP_001528866 
Protein GI158520996 
COG category[R] General function prediction only 
COG ID[COG2940] Proteins containing SET domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCC GATGCTATAG AACCGAAAAA CAGATTCATC TTCTCTTTAA GCAGCAGGGG 
GTTCTTTACC TGCCGCGATC ACGGGTGGAC TTTGAACCGC TGCTGTCCGT CCGCCTGGAC
CGGACCCCTT ATTACCGGGC CAACCGCGAG GAGTTCGCAC ACCTGGCCCG GCTCTATGGT
GATGCGATTC GGGCGGCTGA TGTCGCGCCC ATCTATATTC AGCGTGTCGA CGCCGCCATC
GGCCTGGGGG TGTTTGCCGC GGCCCCGATT CAGAAGGACG CCTTTATCGG TGAGTACGCC
GGCGTGGTCC AGGTCGCGGG AAAGGACGAG CCGGTCTTTG CCGCGGAAAA CGGGCATGAG
TCCGACTACT CGTGGTACTA CCTGGACAAA CCGAAGGGGC TTCCCGAGCT GGAGATCAAC
GGCCGGCAGG AGGGAAACGA GATGCGGTTT GTCAACCACG GGGCCCCACC CAACCTGAAG
GTGGAGCACA CCCTGATCGA CGGCCAGTGG GTGCTCTTTT TCGTGGCCGG CCGGAACATC
GAAAAGGACG AAGAGCTGCT CATCAGTTAT GGCAATGAAT ACTGGGAGGG CGGCTTTCGC
TCCCTGGCCG ACAACGGCGG TTAG
 
Protein sequence
MKSRCYRTEK QIHLLFKQQG VLYLPRSRVD FEPLLSVRLD RTPYYRANRE EFAHLARLYG 
DAIRAADVAP IYIQRVDAAI GLGVFAAAPI QKDAFIGEYA GVVQVAGKDE PVFAAENGHE
SDYSWYYLDK PKGLPELEIN GRQEGNEMRF VNHGAPPNLK VEHTLIDGQW VLFFVAGRNI
EKDEELLISY GNEYWEGGFR SLADNGG