Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0979 |
Symbol | |
ID | 5693814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1140815 |
End bp | 1141438 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641263576 |
Product | nuclear protein SET |
Protein accession | YP_001528866 |
Protein GI | 158520996 |
COG category | [R] General function prediction only |
COG ID | [COG2940] Proteins containing SET domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCC GATGCTATAG AACCGAAAAA CAGATTCATC TTCTCTTTAA GCAGCAGGGG GTTCTTTACC TGCCGCGATC ACGGGTGGAC TTTGAACCGC TGCTGTCCGT CCGCCTGGAC CGGACCCCTT ATTACCGGGC CAACCGCGAG GAGTTCGCAC ACCTGGCCCG GCTCTATGGT GATGCGATTC GGGCGGCTGA TGTCGCGCCC ATCTATATTC AGCGTGTCGA CGCCGCCATC GGCCTGGGGG TGTTTGCCGC GGCCCCGATT CAGAAGGACG CCTTTATCGG TGAGTACGCC GGCGTGGTCC AGGTCGCGGG AAAGGACGAG CCGGTCTTTG CCGCGGAAAA CGGGCATGAG TCCGACTACT CGTGGTACTA CCTGGACAAA CCGAAGGGGC TTCCCGAGCT GGAGATCAAC GGCCGGCAGG AGGGAAACGA GATGCGGTTT GTCAACCACG GGGCCCCACC CAACCTGAAG GTGGAGCACA CCCTGATCGA CGGCCAGTGG GTGCTCTTTT TCGTGGCCGG CCGGAACATC GAAAAGGACG AAGAGCTGCT CATCAGTTAT GGCAATGAAT ACTGGGAGGG CGGCTTTCGC TCCCTGGCCG ACAACGGCGG TTAG
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Protein sequence | MKSRCYRTEK QIHLLFKQQG VLYLPRSRVD FEPLLSVRLD RTPYYRANRE EFAHLARLYG DAIRAADVAP IYIQRVDAAI GLGVFAAAPI QKDAFIGEYA GVVQVAGKDE PVFAAENGHE SDYSWYYLDK PKGLPELEIN GRQEGNEMRF VNHGAPPNLK VEHTLIDGQW VLFFVAGRNI EKDEELLISY GNEYWEGGFR SLADNGG
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