Gene Dole_0957 details

Gene Information

• Locus tag: Dole_0957
• ID: 5693792
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: -
• Start bp: 1117401
• End bp: 1119272
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641263554
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_001528844
• Protein GI: 158520974
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCAATTT ACGAGAAAAC ATACGACATC ATCGTGGTCG GCGCCGGCCA CGCCGGGTGC 
GAGGCGGCTC TGGCCGCGGC CCGCATGGGA TGCGCCGTTC TGCTGCTGGC CATCGACCTG 
GACAAAGTGG CGGCCATGCC CTGCAGCCCC TCCATCGGCG GCACGGCCAA GGGCCACCTA 
GTCAAGGAAA TCGACGCCCT GGGCGGTGAA ATGCCGAAGG CGGCGGACAA AACCGCCATT 
CACTGCAAGG TGTTGAACAC CAAAAAAGGG CCGGCCATTC ACTCCTCCCG CACCCAGAAC 
GACAAGCACC GCTACCACAC GGCCATGAAA CAGTCCGTCG AAGCCCATGC CAACATCGAC 
CTTAAAGCGG CCCTGGTCAC CCGAATCATC GTGGAGGGCG GCAGCGTCAA AGGCGTGATC 
GACCAGACCG GGTTTTCCTG GCAGGCCACC TGCGTGATCA TCACGGCCGG CACCTTTCTG 
GGCGGTCTTG TCCATATCGG CACCCACTCT CACCACGCGG GCCGGGCCGG TGAGTTTGCC 
GCCCTGGAAC TCGCCGACTG CCTGCGGGAA CTGGGGTTTG CCACCGGCCG CATGAAAACC 
GGCACCCCGC CGCGCCTGTC CCGGCCCTCC ATCGACTTTT CAAAATTCGA AATGCAGGGC 
TCCGACGCCG ACTTTCGCCC CTTTTCCGCG GCCACCCGCG CCCTTGAGCT GCCCCGCAGA 
CCCAACTACC TGGGCCATAT ACGGGAAAAC AGCATCGCCA TTGTAAGAAA CAACCTGGCC 
CATTCAGCCC TTTACAGCGG CCGGATCACC GGCACACCGG CCCGGTACTG CCCGTCCTTT 
GAAGACAAGG TGGTCCGGTT TCCCGAGCGG ACCGCGCACC ATCTGATCCT GGAATTTGAG 
GGGCTCGACT CCGACGAGAT CTATGCTTCC GGCCTGGGCA ACAGCCTGCC CATGGAGATC 
CAGCTTGCCT TTGTCCGGTC CGTGGAGGGG CTGGAGTGCG CCGAGATCAT GCGGCCCGCC 
TATGCCATTG AATACGACTA CATCAACCCC ACCCAGCTTT TGCCCACCCT GGAGACCAAG 
CCCGTGGCCG GGCTCTACCT GGCCGGCCAG GTCAACGGTA CCTCGGGATA CGAAGAGGCC 
GCGGCCCAGG GCATGTGGGC CGGCATCAAC GCGGCCTGCC GCGTTCAGAA GCGGCCACCC 
TTTGTCCTGG ACCGGTCCGA AGCCTACATG GGGGTGATGA TCGATGATCT GGTCACCCGG 
GGTACCAGCG AACCCTACCG CATGTTCACC TCCCGGGCCG AGTACCGGCT GCTGCTGCGG 
GAAGACAACG CCGACCTGCG GCTGGCGGAA AAGGGCCTTG AACTGGGCCT GGTGGACAAA 
GAGACCGTGG AGCGCATTCG GGGATACAAA CACCGGATCA AGGCGGAGAT TCAGCGGGTC 
AAAACCACGG TGATAAAACC GGATGATAAA ACCAATGCCC TGCTGGCCCG ACGCCAGTCG 
CCCCCCCTGA CCTCCGGCTC CAGGGCGGAC CAGCTGCTCA AGCGCTCAGA GATCACCTAT 
GCCGACATCA AAACCCTGGC CCCGCCTGAG ACACCCCTGC CCGAAAGGGT GGAGCAGCAG 
GTGGAGATCG AGGTGAAATA CGAGGGGTAT ATCGACCGGC AGCGCCGGGA AATCGCCAAG 
TTCAAGGACC TGGAGATGAT CCGTATTCCC GAAGGCTTTG ACTACACGGC GGTCCACGGC 
CTTTCCAACG AACTCAAGAC CCGGCTGGCC GATATGCGGC CCCTCTCCCT GGGCCAGGCG 
GCCCGCATCG AGGGCATCAC CCCGGCGGCC ATCTCCGTGC TGATGATCGG CATCAAGGCG 
GCCCGGGGAT AA 

 

Protein sequence

MSIYEKTYDI IVVGAGHAGC EAALAAARMG CAVLLLAIDL DKVAAMPCSP SIGGTAKGHL 
VKEIDALGGE MPKAADKTAI HCKVLNTKKG PAIHSSRTQN DKHRYHTAMK QSVEAHANID 
LKAALVTRII VEGGSVKGVI DQTGFSWQAT CVIITAGTFL GGLVHIGTHS HHAGRAGEFA 
ALELADCLRE LGFATGRMKT GTPPRLSRPS IDFSKFEMQG SDADFRPFSA ATRALELPRR 
PNYLGHIREN SIAIVRNNLA HSALYSGRIT GTPARYCPSF EDKVVRFPER TAHHLILEFE 
GLDSDEIYAS GLGNSLPMEI QLAFVRSVEG LECAEIMRPA YAIEYDYINP TQLLPTLETK 
PVAGLYLAGQ VNGTSGYEEA AAQGMWAGIN AACRVQKRPP FVLDRSEAYM GVMIDDLVTR 
GTSEPYRMFT SRAEYRLLLR EDNADLRLAE KGLELGLVDK ETVERIRGYK HRIKAEIQRV 
KTTVIKPDDK TNALLARRQS PPLTSGSRAD QLLKRSEITY ADIKTLAPPE TPLPERVEQQ 
VEIEVKYEGY IDRQRREIAK FKDLEMIRIP EGFDYTAVHG LSNELKTRLA DMRPLSLGQA 
ARIEGITPAA ISVLMIGIKA ARG