Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0955 |
Symbol | |
ID | 5693790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1112252 |
End bp | 1115374 |
Gene Length | 3123 bp |
Protein Length | 1040 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641263552 |
Product | hypothetical protein |
Protein accession | YP_001528842 |
Protein GI | 158520972 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00162474 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACAAA AAAAGAAAAG AATACTGGTC ATTGCCGGCA TCTGTTTTGC CGTTTATTTT ATTGCCATAT TTTTTGTGGC TTCAGCGGTG CTCACGCGCA TGGCGCCGGA AAAGCTGGCC GAATTTTTGG GCCGGCCCGT GGCTGTGGAG AAAATCCGCG CCAACCCGCT GACCCTGTCG GTGACGGTGT ACGGCCTGGA GATCAAGGAC AAAAACAAGA CTGACCCGTT TGTGCGTTTT GAAAAGCTGT ACGTAAACGC GGAGGCCTGG TCTTTAATCA GAAGAGGGTT GGTGTTAAAG CGCGTGCTGC TGGAAAAGCC GGAAATTCAT GTTGCGCGGC TGTCCGGCGC CACCTTTAAT TTTTCCGACC TGCTGGCCGG AGAAAAGGAA GAAGAAAACC CGGCGGAGGA AAAGTCGCCT GCCGAGCCCT TTGGGTTTGC TGTGGCAAAT ATCTCGGTTG TGGACGGAAC TGTGGTGTAC CGGGACCTGC CGTTTGGCAA AACCCACACC ATTTCGCCCA TCAACTGGCA GGTGCCCTTT ATCTCCAATT TTATCCGGCA CCGGAACCGG AAGTTGGAAC CGGCCCTGAC CCTTTCTGTG GACGGGGCAA CTTTATCTGT GGATGTTCAG ACCAAGCCTT TTAAAAACTC CATGGAAACC GTGGTGGACA TGGCCCTTTC CGGCGTGTCG ATTCCCCGCT ACACCGCATA CATGCCAAAG GACCGGATCG GCTTTCAAGT GGAACAGGGG GATGTGGATA TTACGACCCA GATCTCTTTT TACAAAGAAA ACGATCGTTC TGTTGTGACG GTCCAGGGCC AGGCTGCGAT TGTGGATCTG GATGTGAAGG ACAGGGAAGG GGACGGCCTT TTTACCCTGC CCCGGCTGGC GGTCACGGTG CTGCCCTCGG TGGTGACGGA GAGCCGGTTG CATGTCGGCG AGGTGCAAGT CCAGTCCCCC ATTCTGTCGG TGATCCGGCA GGCCGACGGC GTCATCAACC TGGCCGGCCT GGTAATCAGT GGTGAGGCGG CGGCCACGGC CGATGAAAAC ACGCTTTTGG CAGAGACCGA AACGGTTGCC GAGACTGAAG AGGACGGGCA GGCATCTCCT CAGGCCGATG TGGCTGAATC GGAACAGGCA TCTGAAACGG TTCCGCCGGG CCAGCCGGCC GAGGCTGCTG AACCGGATCC GCCTGCGGTT GCCGACGCCC CTGAAGAAGA CACGAGTGAG CCCTTTGTCG TTGACGTGGA CAGGTTTGTG CTGACCGGCG GCACGGCCCG ATTTGTCGAT TTTGCCGTTG CCGGTCCGGA AGACGGGCCC GTGGAAAACG CCATCAGCGA CCTTAATGTC ACGGTGGCTC CTTTTACCAC GGCGCCTGAA AAAGAGTCGC GGTTTGACGT CAGTGCCCTG ATCAACGGTG CGGCCCCGCT CAATGTCAGC GGTCAGATGG TGCTGACCCC GCTGTCCGTG GAGAGTGATG TCCGCCTTTC CGACGTGGCC CTTGCCTGGG GCCAGCCCTA TCTGCCGGAC AACGTGCGCC TGGTGATCAA CGATGGCCGG GCCGCCGTTT CCGGACATCT TTCTCTGGCC GCCGCCAAAG AGGGGCAGAT CTCGGCAACC GTCACCGGAG AGGCGGGAGT CAAAGATTTT GCCACGTCAG ACCCGGAAAA AGGGGAATCT TTTTTACGGT GGAGCGATTT TACCTTGGAC GGGATCAAGG TCTCCACGCC CCCCCTGCGG GTGAACGTGG ACAGCATTGC CTTTACGGAT CTTGCGCAGC AGGTGGTGGT GTTTGAAGAC GGGGCCACCA ATATTGCCAG GATTTTTATC AGCCCGGAAA CCCCGGCGGA ACCAGCGGAC CATGCCCCGG AAGCGGCAGA ACCAAAGGAC ACGGGCGCAT CGGTGACGCC CATACAAATC GGCCGGTTTC TGATGAACAA CACGGAACTT AAATTTGCCG ACCGGAGCGT TGACCCGCAT TATGCCACCC GGCTGACGCT GACGGACCTG AAAGTCACCG GTCTGACCTC AGAGGATTTC AAAGCTGCGG ATGTAATGGC AAAAGGCACC ATTGACGGAT ATGCGCCGGT GCGTATCACC GGTGCCATCA ATCCCCTGGG CACCGACCTG TTTATGGACC TGGATGTAAA GCTGAGCAAC ATGGAGATGG TACCGCTGTC GGCCTACACG GGAAAGTATA TAGGCCGGGC CATTGAAAAG GGCAAGATGG ACCTGGACCT GCAGTACGAC ATTCAGCAGA AGGTGCTTTC CGCCGACAAC CATATCTTAT TAGACCAGTT TACCCTGGGC AACACCGTGG AGAGCCCGGA GGCCATGAAC CTGCCGGTGG GCCTGGCCGT GGCCCTGCTT AAAGACCGCA AGGGCGTGAT TGATGTGAAC CTGCCGGTGT CGGGCCGCAT CGATGATCCC GAGTTCAGGG TCGGCAGGAT CGTATTCAAG GCCCTGGCCA ACCTGATCAC AAAGGCGGCC ACCTCGCCGT TTGCCCTGGT GGGTTCCCTG GTGGGCGGCG GTGAAGAGAT GCGGTTTATC GAGTTTGAAC CCGGCTGGGC CGAACTGGAC GAACTGGGCC GTCAGAAACT GGACGGCGTG AAAAAACTGC TGGTTGAGCG GCCGGCCCTG AAGCTGGAGA TCCTGGGGTA CGCCGATCCT GATGCCGACC GGAGGGCACT GGCCGCCATT GCTCTGGAAC GCACGATCAA GGCGCCGGCC CTGGAAAAGT TGGGCCAGAA GGGAGAATCC CCGGATTCAG AGACCCTGGC CACAGCGATC CTGCCGGCCG GTCAGTATGA CCGGACCCTG CGCAGGATCT ATGAAAAAGA GGTGGAGGAA AAGCCGATAG AAGGGGTGGT GGTAAAAAAG GCCGATGATC CCACGCTGTC GATAGAAGAG ATGGAGACGG CCATTGTGGA GCGCCGGGCC GGTGCCGTTA CCGACGCCGA ACTGGGCCTG CTGGCAAAAC AGCGGGCCGA AAAGGTCAAG GATTACCTGC TGTCGGATGA AACCCTTTCT CCGGAGCGGG TTTTTATGAA GGCCCCGGGC AACATCTTTA AAACCGCCGA TGGCGAATTT GCCGCCAGCC GCGTGGAGCT GGGGGTGCAG TAG
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Protein sequence | MTQKKKRILV IAGICFAVYF IAIFFVASAV LTRMAPEKLA EFLGRPVAVE KIRANPLTLS VTVYGLEIKD KNKTDPFVRF EKLYVNAEAW SLIRRGLVLK RVLLEKPEIH VARLSGATFN FSDLLAGEKE EENPAEEKSP AEPFGFAVAN ISVVDGTVVY RDLPFGKTHT ISPINWQVPF ISNFIRHRNR KLEPALTLSV DGATLSVDVQ TKPFKNSMET VVDMALSGVS IPRYTAYMPK DRIGFQVEQG DVDITTQISF YKENDRSVVT VQGQAAIVDL DVKDREGDGL FTLPRLAVTV LPSVVTESRL HVGEVQVQSP ILSVIRQADG VINLAGLVIS GEAAATADEN TLLAETETVA ETEEDGQASP QADVAESEQA SETVPPGQPA EAAEPDPPAV ADAPEEDTSE PFVVDVDRFV LTGGTARFVD FAVAGPEDGP VENAISDLNV TVAPFTTAPE KESRFDVSAL INGAAPLNVS GQMVLTPLSV ESDVRLSDVA LAWGQPYLPD NVRLVINDGR AAVSGHLSLA AAKEGQISAT VTGEAGVKDF ATSDPEKGES FLRWSDFTLD GIKVSTPPLR VNVDSIAFTD LAQQVVVFED GATNIARIFI SPETPAEPAD HAPEAAEPKD TGASVTPIQI GRFLMNNTEL KFADRSVDPH YATRLTLTDL KVTGLTSEDF KAADVMAKGT IDGYAPVRIT GAINPLGTDL FMDLDVKLSN MEMVPLSAYT GKYIGRAIEK GKMDLDLQYD IQQKVLSADN HILLDQFTLG NTVESPEAMN LPVGLAVALL KDRKGVIDVN LPVSGRIDDP EFRVGRIVFK ALANLITKAA TSPFALVGSL VGGGEEMRFI EFEPGWAELD ELGRQKLDGV KKLLVERPAL KLEILGYADP DADRRALAAI ALERTIKAPA LEKLGQKGES PDSETLATAI LPAGQYDRTL RRIYEKEVEE KPIEGVVVKK ADDPTLSIEE METAIVERRA GAVTDAELGL LAKQRAEKVK DYLLSDETLS PERVFMKAPG NIFKTADGEF AASRVELGVQ
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