Gene Dole_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0955 
Symbol 
ID5693790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1112252 
End bp1115374 
Gene Length3123 bp 
Protein Length1040 aa 
Translation table11 
GC content58% 
IMG OID641263552 
Producthypothetical protein 
Protein accessionYP_001528842 
Protein GI158520972 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2982] Uncharacterized protein involved in outer membrane biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00162474 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAA AAAAGAAAAG AATACTGGTC ATTGCCGGCA TCTGTTTTGC CGTTTATTTT 
ATTGCCATAT TTTTTGTGGC TTCAGCGGTG CTCACGCGCA TGGCGCCGGA AAAGCTGGCC
GAATTTTTGG GCCGGCCCGT GGCTGTGGAG AAAATCCGCG CCAACCCGCT GACCCTGTCG
GTGACGGTGT ACGGCCTGGA GATCAAGGAC AAAAACAAGA CTGACCCGTT TGTGCGTTTT
GAAAAGCTGT ACGTAAACGC GGAGGCCTGG TCTTTAATCA GAAGAGGGTT GGTGTTAAAG
CGCGTGCTGC TGGAAAAGCC GGAAATTCAT GTTGCGCGGC TGTCCGGCGC CACCTTTAAT
TTTTCCGACC TGCTGGCCGG AGAAAAGGAA GAAGAAAACC CGGCGGAGGA AAAGTCGCCT
GCCGAGCCCT TTGGGTTTGC TGTGGCAAAT ATCTCGGTTG TGGACGGAAC TGTGGTGTAC
CGGGACCTGC CGTTTGGCAA AACCCACACC ATTTCGCCCA TCAACTGGCA GGTGCCCTTT
ATCTCCAATT TTATCCGGCA CCGGAACCGG AAGTTGGAAC CGGCCCTGAC CCTTTCTGTG
GACGGGGCAA CTTTATCTGT GGATGTTCAG ACCAAGCCTT TTAAAAACTC CATGGAAACC
GTGGTGGACA TGGCCCTTTC CGGCGTGTCG ATTCCCCGCT ACACCGCATA CATGCCAAAG
GACCGGATCG GCTTTCAAGT GGAACAGGGG GATGTGGATA TTACGACCCA GATCTCTTTT
TACAAAGAAA ACGATCGTTC TGTTGTGACG GTCCAGGGCC AGGCTGCGAT TGTGGATCTG
GATGTGAAGG ACAGGGAAGG GGACGGCCTT TTTACCCTGC CCCGGCTGGC GGTCACGGTG
CTGCCCTCGG TGGTGACGGA GAGCCGGTTG CATGTCGGCG AGGTGCAAGT CCAGTCCCCC
ATTCTGTCGG TGATCCGGCA GGCCGACGGC GTCATCAACC TGGCCGGCCT GGTAATCAGT
GGTGAGGCGG CGGCCACGGC CGATGAAAAC ACGCTTTTGG CAGAGACCGA AACGGTTGCC
GAGACTGAAG AGGACGGGCA GGCATCTCCT CAGGCCGATG TGGCTGAATC GGAACAGGCA
TCTGAAACGG TTCCGCCGGG CCAGCCGGCC GAGGCTGCTG AACCGGATCC GCCTGCGGTT
GCCGACGCCC CTGAAGAAGA CACGAGTGAG CCCTTTGTCG TTGACGTGGA CAGGTTTGTG
CTGACCGGCG GCACGGCCCG ATTTGTCGAT TTTGCCGTTG CCGGTCCGGA AGACGGGCCC
GTGGAAAACG CCATCAGCGA CCTTAATGTC ACGGTGGCTC CTTTTACCAC GGCGCCTGAA
AAAGAGTCGC GGTTTGACGT CAGTGCCCTG ATCAACGGTG CGGCCCCGCT CAATGTCAGC
GGTCAGATGG TGCTGACCCC GCTGTCCGTG GAGAGTGATG TCCGCCTTTC CGACGTGGCC
CTTGCCTGGG GCCAGCCCTA TCTGCCGGAC AACGTGCGCC TGGTGATCAA CGATGGCCGG
GCCGCCGTTT CCGGACATCT TTCTCTGGCC GCCGCCAAAG AGGGGCAGAT CTCGGCAACC
GTCACCGGAG AGGCGGGAGT CAAAGATTTT GCCACGTCAG ACCCGGAAAA AGGGGAATCT
TTTTTACGGT GGAGCGATTT TACCTTGGAC GGGATCAAGG TCTCCACGCC CCCCCTGCGG
GTGAACGTGG ACAGCATTGC CTTTACGGAT CTTGCGCAGC AGGTGGTGGT GTTTGAAGAC
GGGGCCACCA ATATTGCCAG GATTTTTATC AGCCCGGAAA CCCCGGCGGA ACCAGCGGAC
CATGCCCCGG AAGCGGCAGA ACCAAAGGAC ACGGGCGCAT CGGTGACGCC CATACAAATC
GGCCGGTTTC TGATGAACAA CACGGAACTT AAATTTGCCG ACCGGAGCGT TGACCCGCAT
TATGCCACCC GGCTGACGCT GACGGACCTG AAAGTCACCG GTCTGACCTC AGAGGATTTC
AAAGCTGCGG ATGTAATGGC AAAAGGCACC ATTGACGGAT ATGCGCCGGT GCGTATCACC
GGTGCCATCA ATCCCCTGGG CACCGACCTG TTTATGGACC TGGATGTAAA GCTGAGCAAC
ATGGAGATGG TACCGCTGTC GGCCTACACG GGAAAGTATA TAGGCCGGGC CATTGAAAAG
GGCAAGATGG ACCTGGACCT GCAGTACGAC ATTCAGCAGA AGGTGCTTTC CGCCGACAAC
CATATCTTAT TAGACCAGTT TACCCTGGGC AACACCGTGG AGAGCCCGGA GGCCATGAAC
CTGCCGGTGG GCCTGGCCGT GGCCCTGCTT AAAGACCGCA AGGGCGTGAT TGATGTGAAC
CTGCCGGTGT CGGGCCGCAT CGATGATCCC GAGTTCAGGG TCGGCAGGAT CGTATTCAAG
GCCCTGGCCA ACCTGATCAC AAAGGCGGCC ACCTCGCCGT TTGCCCTGGT GGGTTCCCTG
GTGGGCGGCG GTGAAGAGAT GCGGTTTATC GAGTTTGAAC CCGGCTGGGC CGAACTGGAC
GAACTGGGCC GTCAGAAACT GGACGGCGTG AAAAAACTGC TGGTTGAGCG GCCGGCCCTG
AAGCTGGAGA TCCTGGGGTA CGCCGATCCT GATGCCGACC GGAGGGCACT GGCCGCCATT
GCTCTGGAAC GCACGATCAA GGCGCCGGCC CTGGAAAAGT TGGGCCAGAA GGGAGAATCC
CCGGATTCAG AGACCCTGGC CACAGCGATC CTGCCGGCCG GTCAGTATGA CCGGACCCTG
CGCAGGATCT ATGAAAAAGA GGTGGAGGAA AAGCCGATAG AAGGGGTGGT GGTAAAAAAG
GCCGATGATC CCACGCTGTC GATAGAAGAG ATGGAGACGG CCATTGTGGA GCGCCGGGCC
GGTGCCGTTA CCGACGCCGA ACTGGGCCTG CTGGCAAAAC AGCGGGCCGA AAAGGTCAAG
GATTACCTGC TGTCGGATGA AACCCTTTCT CCGGAGCGGG TTTTTATGAA GGCCCCGGGC
AACATCTTTA AAACCGCCGA TGGCGAATTT GCCGCCAGCC GCGTGGAGCT GGGGGTGCAG
TAG
 
Protein sequence
MTQKKKRILV IAGICFAVYF IAIFFVASAV LTRMAPEKLA EFLGRPVAVE KIRANPLTLS 
VTVYGLEIKD KNKTDPFVRF EKLYVNAEAW SLIRRGLVLK RVLLEKPEIH VARLSGATFN
FSDLLAGEKE EENPAEEKSP AEPFGFAVAN ISVVDGTVVY RDLPFGKTHT ISPINWQVPF
ISNFIRHRNR KLEPALTLSV DGATLSVDVQ TKPFKNSMET VVDMALSGVS IPRYTAYMPK
DRIGFQVEQG DVDITTQISF YKENDRSVVT VQGQAAIVDL DVKDREGDGL FTLPRLAVTV
LPSVVTESRL HVGEVQVQSP ILSVIRQADG VINLAGLVIS GEAAATADEN TLLAETETVA
ETEEDGQASP QADVAESEQA SETVPPGQPA EAAEPDPPAV ADAPEEDTSE PFVVDVDRFV
LTGGTARFVD FAVAGPEDGP VENAISDLNV TVAPFTTAPE KESRFDVSAL INGAAPLNVS
GQMVLTPLSV ESDVRLSDVA LAWGQPYLPD NVRLVINDGR AAVSGHLSLA AAKEGQISAT
VTGEAGVKDF ATSDPEKGES FLRWSDFTLD GIKVSTPPLR VNVDSIAFTD LAQQVVVFED
GATNIARIFI SPETPAEPAD HAPEAAEPKD TGASVTPIQI GRFLMNNTEL KFADRSVDPH
YATRLTLTDL KVTGLTSEDF KAADVMAKGT IDGYAPVRIT GAINPLGTDL FMDLDVKLSN
MEMVPLSAYT GKYIGRAIEK GKMDLDLQYD IQQKVLSADN HILLDQFTLG NTVESPEAMN
LPVGLAVALL KDRKGVIDVN LPVSGRIDDP EFRVGRIVFK ALANLITKAA TSPFALVGSL
VGGGEEMRFI EFEPGWAELD ELGRQKLDGV KKLLVERPAL KLEILGYADP DADRRALAAI
ALERTIKAPA LEKLGQKGES PDSETLATAI LPAGQYDRTL RRIYEKEVEE KPIEGVVVKK
ADDPTLSIEE METAIVERRA GAVTDAELGL LAKQRAEKVK DYLLSDETLS PERVFMKAPG
NIFKTADGEF AASRVELGVQ