Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0949 |
Symbol | |
ID | 5693784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1105709 |
End bp | 1106953 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641263546 |
Product | PGAP1 family protein |
Protein accession | YP_001528836 |
Protein GI | 158520966 |
COG category | [R] General function prediction only |
COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000633482 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGGCCAC GGAACAGATT TTTTCCGTCT GCCAACAACT TTTTTATCGA AAAAAAGGAG GAGATCAAGA TGGTAAAACG ATTTTTTGCT TTTGTTCTGG TAAGTTGTCT GATTGCGGCT CTGCCGGGGG CCGTGTTTGC CCGGGCCGAT AAAACCACCT ATCCGGTGGT ATTTGCCCAC GGCATGCTGG GGTTTGATGA ACTGGTGGGC ATCGATTATT TCGGCAATGA TTACGGTGTA TTTGTCGGCG ATCCCTGCGA CGGTTTTCTG GAGACCTCCT GCAACAGCGA AATTGATAAA AACCAGCAGG CCTTTGCCGC GTCGGTCAAT CCGTTTCAGT CCTCTGAACT AAGGGGTCTG GAGTTGGCCG ATGCCATAGA GAGCTACATG GCCACCGTAA ACGCGGACTG CGTGAATATC GTGGGCCACT CCCAGGGCGG CATGGACGCC AGAAAGGCGG CCAAGCTGCT TTACGACCGA AAGGGCCGGC AGGTGGTCAA GGTGATGGTG TCAATCTCCT CCCCCCATCG CGGATCACCG GTGGGCAAGG GCGTGCTGGA CCAGGGCCCC GACGGCATGA ACGCCTTTCT CGGCGTGCTG GTTGATTACC TGGTGGGGCC TGTGCTGGTG GGGGATCTCA GCGACTTTGA AGCCAGCATG AAGGCATTTG TGTATGACGA TTACGATCCC AACGACGGGG TTGTCACCGG CGCCAAGGCC TTTAACAACG CTTACGGCAT CAACGACACC CATGTACGGC ACTATGCCTC CATCATCACC GCCACCCAGG GAAACCTCAA CCCGATTCTT GGCGCCCTGG GCCTTGTGGC GCCTCTTGAC ATCGACGGCG ACGGCTGGTG CGCCGACTAC ACGGACTGCA ACAACGACGG CGCCGCCGGC TGCGGAGACG GGGATTTTGA GGACGGCGAC GACGACGGAC TGGTGGGCAT CAACTCCCAG CAAATGGGCT ACCGCCTGAA GCACAAAAAG AGCTGGCTGT GGGGCACCTA TTTTGACGAA GATTCGACCA CCGGCTATGT GGGCGACATC GACCGGCCCA GCCAGGTGCA GGCCACATCC TACAGCAGTG TCATCGATCA GGACCATCTG GATGTACTGG GCCTGGGCGT GATTCCCTAC CTGATTCCCG ATGACTTTGA TGAGGAAGGC TTCTACGCCG ACCTGATCGA CTACATCGCC GACAACGAAG GAACCAGCAG CTCCGGCTGG TGGTGGTTCT GGTAG
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Protein sequence | MGPRNRFFPS ANNFFIEKKE EIKMVKRFFA FVLVSCLIAA LPGAVFARAD KTTYPVVFAH GMLGFDELVG IDYFGNDYGV FVGDPCDGFL ETSCNSEIDK NQQAFAASVN PFQSSELRGL ELADAIESYM ATVNADCVNI VGHSQGGMDA RKAAKLLYDR KGRQVVKVMV SISSPHRGSP VGKGVLDQGP DGMNAFLGVL VDYLVGPVLV GDLSDFEASM KAFVYDDYDP NDGVVTGAKA FNNAYGINDT HVRHYASIIT ATQGNLNPIL GALGLVAPLD IDGDGWCADY TDCNNDGAAG CGDGDFEDGD DDGLVGINSQ QMGYRLKHKK SWLWGTYFDE DSTTGYVGDI DRPSQVQATS YSSVIDQDHL DVLGLGVIPY LIPDDFDEEG FYADLIDYIA DNEGTSSSGW WWFW
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