| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0940 |
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| Symbol | |
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| ID | 5693775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1096596 |
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| End bp | 1097606 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641263537 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001528827 |
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| Protein GI | 158520957 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.756005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACTT CCGGTCCCAA CCTGCTTGAA GTCGAACGCC TGAAAAAATA TTTTCCCGTG
CGGGGCGGCG TGTTTCTGCG GCCCGTGGCC CAGGTGCATG CCGTGGACGA CATCTCCTTT
GCCATTCGAC CCGGAGAGAC CCTGGGCCTG GTGGGAGAGT CGGGCTGCGG CAAGACCACG
GTGGGCCGCT GCGTGGCCCG GCTTTACGAG CCCACGGCCG GCGCCATCCG GTTTGACAAC
ACCGACCTGG CCGGAGTCCG GGGCGCGGCC CTGCGGCGGC TGCGGCGTCA TATTCAGATG
GTGTTCCAGG ACCCGTTCGA GTCCTTGAAT CCCCGCCACA CCGTGGGCAC CATGCTTGAA
GAACCTTTTA AGATTCACCG CATCGGCACC GCCGTCGAAC GCCGGCAGTC AGTACAATCA
CTTTTAGACC GGGTGGGACT TTCCGCAAAC GCGGCCGACC GGTTTCCCCA CGAGTTCAGC
GGGGGCCAGC GCCAGCGCAT CGGCATTGCC CGGGCCATTG CCTTAAACCC GCGTATGATC
ATCTGCGACG AGCCGGTGTC GGCGTTGGAT GTCTCCATTC AGTCCCAGAT TTTAAACCTC
CTGCTCGACC TTCAGCAGGA ATCCGGGTTT ACCTGCCTGT TTATCGCCCA CGACCTGGCC
GTGGTGCGCC ACGTTTCTGA CCGCATCGCC GTGATGTACC TGGGAAAAAT CGTGGAAATC
ACCGACGCCG ACACCATCTA TGCCACGCCC CTGCATCCCT ACACCAGTGC CCTTCTCTCC
GCCATTCCCA TTGCCGATCC CACCGCAAAG CGGCAAAAAC AGGTGCTTTA CGGAGACGTG
CCCTCCCCGT CAGCGCCGCC GCCGGGCTGC CGGTTTCACA CCCGGTGTCC CCATGCCGCC
GACATCTGCA AAACCTCCGA GCCCTCGCTG GTACCGGCCG CCTTTTCCCC GGCACCGGAT
CACCAGGTGG CCTGCCACCG GGCCGAGGAG CTCAAAAATC TATTGATATA A
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| Protein sequence | MATSGPNLLE VERLKKYFPV RGGVFLRPVA QVHAVDDISF AIRPGETLGL VGESGCGKTT
VGRCVARLYE PTAGAIRFDN TDLAGVRGAA LRRLRRHIQM VFQDPFESLN PRHTVGTMLE
EPFKIHRIGT AVERRQSVQS LLDRVGLSAN AADRFPHEFS GGQRQRIGIA RAIALNPRMI
ICDEPVSALD VSIQSQILNL LLDLQQESGF TCLFIAHDLA VVRHVSDRIA VMYLGKIVEI
TDADTIYATP LHPYTSALLS AIPIADPTAK RQKQVLYGDV PSPSAPPPGC RFHTRCPHAA
DICKTSEPSL VPAAFSPAPD HQVACHRAEE LKNLLI
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