Gene Dole_0919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0919 
Symbol 
ID5693754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1074430 
End bp1075341 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content42% 
IMG OID641263516 
ProductHNH endonuclease 
Protein accessionYP_001528806 
Protein GI158520936 
COG category[V] Defense mechanisms 
COG ID[COG3440] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAA GAACTCCATA TGCAAGAAGT CCAGAAAGCA ATTCACGTGA AACTTCAATG 
CGTAAGGAAT TAGCTCCATT TGTATTAAAA AATATCGGAG AAATCATTTC AGATCGCAAA
GTTAGTGGTA TGCAAATGAT TACAGTCCAA CCTATATCCG GTCCTTCACT TGTTGTTTGG
GTAAAATGCG CCTGGAAACC AGGCAATTCA GGAAATTGCG CTGTCCAGAT GGCATTTCCA
GGCAAAGAAG ATCGCGCTCA GACTGCAGAT GAAGTTGTAG GGGTCGTGCT TGAAAAAACA
AAACGTGCTA ACGACCGAGG TGCAACCCAC ATTTTATTGT TGGCCGCAGA CAATGATGGC
CATAAGCCTT TGGCTGCCTA TATTCTTTCT GTTAATCAAG TTGGTAGCGT CGTAAAAGAA
GCTGTCGCAG TTGACGAATC ACTCACGCGG AATGGAGCTT CTCCAAGCAT TTACATAACC
GCAAAGGGTG ACCGGCAAAT AGAGCTGGTC AATATTGTAA AAAAATATTC TATAGACCTC
CTCAAATCAT CAGAAAATCA ATTGCCATCT ACGGACGCAA TAAACGACCT AAACGCTTAT
CCACCAGGGA TTTCTGAGCC AGAGAAAATA TCTCGGATGT CACCTTCATA CTCAAGAGAC
CCCAAAATCA GGTCTTTTGT GATTAAGCGT GCTAAAGGTC GCTGTGAGTA TTGTGGGGAA
CAAGGATTTT TAATGTCTGA TGGTCAAAAC TATTATTTAG AAGCACATCA TATAATTGCC
CTCGCTGACG AAGGAGAAGA TACTGTTGAA AATGTAATAG CTCTTTGCCC AAAGCATCAT
CGAGAAGCGC ATTTCGGGGC CAACAAGGAA AAACTTGAAG TTGAAATGGC GAAATTAATA
AAGCAGAACT AA
 
Protein sequence
MTKRTPYARS PESNSRETSM RKELAPFVLK NIGEIISDRK VSGMQMITVQ PISGPSLVVW 
VKCAWKPGNS GNCAVQMAFP GKEDRAQTAD EVVGVVLEKT KRANDRGATH ILLLAADNDG
HKPLAAYILS VNQVGSVVKE AVAVDESLTR NGASPSIYIT AKGDRQIELV NIVKKYSIDL
LKSSENQLPS TDAINDLNAY PPGISEPEKI SRMSPSYSRD PKIRSFVIKR AKGRCEYCGE
QGFLMSDGQN YYLEAHHIIA LADEGEDTVE NVIALCPKHH REAHFGANKE KLEVEMAKLI
KQN