| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0908 |
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| Symbol | |
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| ID | 5693743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1063053 |
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| End bp | 1065353 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641263505 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001528795 |
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| Protein GI | 158520925 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B
[TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTCCC TGCTTAAAAA ACTGATCCTC ATCAGCGGCG TTCTTCTGGT ACTTGCGACG
GCGACAGCCG GCGGATACTG CTGGTACCTG TCCGGTCATA TCGAAGAGCG CTTTGCCGGC
AGAAAATGGG ACATCCCCTC CACCATCTAT TCAGACACCA CACCCCTGTT TCCCGGCAAA
CAGATCGACC TTTTTGCGTT TGAAAAAAAA TTAAAGAACC TGGAATACCG GAAAACAACA
GGCCGGCCTG AAAAACCAGG AACGTACCGC CTGGTGGACA CGGGCGTTGA AATTCATTTC
AAGGACCTGC ATTTGCCGGG CAATATCCGG GAAGGCTTTC CGGCCCGCCT GGAGATCAAA
AACCGCCGCA TTCACAATAT TCGCCGGATG GACACGGGCG AGGCCCTCCC CCTGGTGGAA
CTGGAACCGG AAGTGATCAT GCAGTTTTTC GGCAAAGAGC GGGAGCTGCG GCGGGTGGTT
TCCATTTCCC AGGTGCCCGA GTACCTGGTC CACGCGGTGC TGGCCGCCGA AGATCACCGG
TTCTATACCC ATTTCGGCGT GGACCCCGCC GGTATTCTCC GGGCCGTGGC CGCCAACATT
CAGCATGGCG GCATTCGCCA GGGCGGCTCC ACCCTGACCC AGCAGCTGGC CAAGAACTAT
TTTCTCACGC CGGAGCGGAC CTTCAGGCGA AAGCTTCATG AGCTGTTCAT CGCCGTGACC
CTGGAGATAA AATACAGCAA GGATCAAATT CTTGAGATCT ACCTGAACGA AATCTACCTG
GGCCAGAAGG GGTCGGCCTC CATCAACGGG GTGGGCCGGG CCGCTGACTT TTATTTCGGC
AAACCGGTGG AGGACCTGAC CCTGCCCGAA TCGGCCATCA TCGCCGGCAT CATCAAGGGC
CCCAACCTTT TTTCGCCCTA CACCCACCCG GACAGATGCA GGGACCGGAG AAACCAGGTG
TTGGCAGCCA TGTTTGAATC CGGCTGGATC ACCGAAGACC AGCTGGCCGA AGCAACGGCC
CGGCCCATTG AAACCGTGGG GTTTGAAAAG TACCGGCGAC AGGCCCCCTA TTTTCTGGAC
TATGTATCCG CCCAGCTGGA AGCCCTTTAT CCCCAGACCA CGCTTTCCAG CATGGGGTTT
TCCATCTACA CCACCCTGGA CCCCGAGGTC CAGTCCGCGG CGGAAACGGC CCTTGCCAGC
GGCCTTGCCC GGCTGGAAGC AGACCTGCCG GCGCTCAGAA GGAATGATCC TGAAAAAAAG
CTTCAGGGCG CCGTGGTGGT GATGCAGCCG AGAACCGGCA ACATTCTTGC CATGGTGGGG
GGCCGGGACT ACGCAACCAG CCAGTTCAAC CGGATCACCC AGTCCCGCCG CCAGCCCGGA
AGCTGTTTCA AGCCCATTGT CACGGCGGCC CTGCTGGACC TGTTCAAACC CTCGGACCTG
CTGGCCAACC GGAAGACCAC TTACCTGATA AACGGCCGGG ACTGGACCCC GGAAAACTTC
GGCGAGATTC CGGGGGACAC CATTTCGGTG CGGGACATGC TGCGGCTCTC CTGCAACCGG
GCCGCCGTGG ACATGGTGGT GCGCGGCGGG CCGGACACGG CGGTCAAACA GATCAGCCGG
TTCAACTTCT CAACGCCGAT GCAGCCCTAT CCTTCTATCG CCCTGGGGGC CTTTGAGGTG
ATCCCATTAG AACTGGCCCG GGCCTATTGC GCCTTTGCCG CCGACGGGGT GTTGCCCTTT
CCCCTGTCGG TTCGGGACGT GATTGATGAA AACGACAACC AGCTGGTCCG TCGTCACATG
GATATCCAGG CGGTGCTCTC TCCGGCAAAA GCCTTTCTTG TCACCTCCAT GCTGGAATCC
GTGGTGACCG GCGGAACCGC AAAATCCCTG AAAGAAAGGG GTGTCGATTT TTCCCTGGCC
GGCAAAACCG GCACCACCAA CGATTACAAA GATGCCTGGT TTGTCGGCTA TACCCCCGAT
TTCCTGGCCC TGGTCTGGGT GGGGTTTGAC AACGGGGATT CGATCTTTTC CACCGGGTCC
GGGGCGGCCC TGCCCATCTT TGCCGACCTG GTCAACGCCA TGCCCGGGTA TGTTTCCAAC
ACCCCGTTTA CTATTCCGCC AGGTGTGGTA AAAAGAAGGG TATGCGGGGA CAGTGGCGAA
CTGGCGGTCT CCGGCCGGTG CCCGGCGCCC TACGATGAAT ATTTTCTGGA GGAAAACCAG
CCGGTGGCCA AATGCCGGCT CCACGCGGGG TCCGGCGTGT TTAAAAGGAT GTTTGATGGA
TTCAGGGGGC TGTTCGAATA A
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| Protein sequence | MLSLLKKLIL ISGVLLVLAT ATAGGYCWYL SGHIEERFAG RKWDIPSTIY SDTTPLFPGK
QIDLFAFEKK LKNLEYRKTT GRPEKPGTYR LVDTGVEIHF KDLHLPGNIR EGFPARLEIK
NRRIHNIRRM DTGEALPLVE LEPEVIMQFF GKERELRRVV SISQVPEYLV HAVLAAEDHR
FYTHFGVDPA GILRAVAANI QHGGIRQGGS TLTQQLAKNY FLTPERTFRR KLHELFIAVT
LEIKYSKDQI LEIYLNEIYL GQKGSASING VGRAADFYFG KPVEDLTLPE SAIIAGIIKG
PNLFSPYTHP DRCRDRRNQV LAAMFESGWI TEDQLAEATA RPIETVGFEK YRRQAPYFLD
YVSAQLEALY PQTTLSSMGF SIYTTLDPEV QSAAETALAS GLARLEADLP ALRRNDPEKK
LQGAVVVMQP RTGNILAMVG GRDYATSQFN RITQSRRQPG SCFKPIVTAA LLDLFKPSDL
LANRKTTYLI NGRDWTPENF GEIPGDTISV RDMLRLSCNR AAVDMVVRGG PDTAVKQISR
FNFSTPMQPY PSIALGAFEV IPLELARAYC AFAADGVLPF PLSVRDVIDE NDNQLVRRHM
DIQAVLSPAK AFLVTSMLES VVTGGTAKSL KERGVDFSLA GKTGTTNDYK DAWFVGYTPD
FLALVWVGFD NGDSIFSTGS GAALPIFADL VNAMPGYVSN TPFTIPPGVV KRRVCGDSGE
LAVSGRCPAP YDEYFLEENQ PVAKCRLHAG SGVFKRMFDG FRGLFE
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