| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0884 |
|---|
| Symbol | |
|---|
| ID | 5693719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 1035339 |
|---|
| End bp | 1036616 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641263481 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001528771 |
|---|
| Protein GI | 158520901 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2116] Formate/nitrite family of transporters
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCC AGCGGATGCT GATTATAGAT GATGAAGAAA TTGTTCTGCG CTCCTGCCAG
AGGGTGTTTG CCGACGAGGG GTTCAGCGTG GTCATCACCC AGAACCCGGC TGAAGGACTT
CGCCTGGCGT CGGAATCCTT TTTCGACGTG ATCCTGTGCG ACTGGAAGAT GCCGGGGTTT
GACGGCATGG ACGTTGTGGC CGAACTGGAC AAGCGGTCCC CCGAATCGGT GGTGGTGATG
ATCAGCGGGT TCCCTTCCGT GGGACGGGCC ACCGAAGCCC TGAAGCGGGG CGCCATGGAT
TACGTATCCA AGCCCTTTAC TCCTGAAGAG ATCACCGCCG TGGTGCAGAA GGCTGTACAG
CGAAAGCTTT CCGAAGAAAA AAAGGCCATC GGCCGTTTTG AAAAAATCAT CGGCTCCCTT
CAGTTTCCCG TGCCCGGCAT CGAAGACAAG ACGCCCAAGA CCATTGCCGA GACCGTGGCT
TCCACCATCG GCGTGGGTAA GGTGACATCG CCATGGCGCA CCGTGACCGT GCTGGGCCTG
CTGGCCGGTG CCTACATCGG GTTCGGGGGG CTGCTCTCCA CGTCGGTCAC CTTTGACATG
AACGCCGTCG TGGGCATCGG GCTGACCAAG TTCATGGCCG GCGCGGCCTT CAGCCTGGGC
CTGATGCTGG TGGTCATTGC CGGGGCCGAG CTGTTTACCG GCAACAACCT GATGATATCC
AGCGTGCTGA CAAAAGACAT CACCTTTATC GACATGATCA AGCGGTGGGG AGTGGTTTAC
CTGGCCAACC TGGCCGGCTC CATCCTGATC GCCCTGATTC TGCTGCTGTC GGGCCTGTGG
AAAACCGGCA ACGGGGCACT GGGCGCCGCC GCCGTGAACG TTGCCGTGGC CAAGGTCTCC
CTGGGATTCG GCGAAGCCCT GGTCCGGGGT GTCGGGTGTA ACTGGCTGGT CTGCCTGGCG
GTGTGGATGG CCCTGGCCTC CAGCCAGACC ATCGGCAAGA TCTTTGCCAT CTTTTTTCCC
ATCATGGGAT TTGTGGCCAT CGGGTTTGAG CACTGCGTGG CCAACATGTA CTTTATTCCG
GCGGGCATCT TCCTGCACCA TTGGGCCGAC AGCCCCGCCA TCGCGGCGGT CACGACGGAC
AACCTCACCT GGTTTGCTTT TTTGTGGAAA AACCTGCTGC CCGTCACCAT CGGCAACATC
ATCGGCGGCG GCGTGTTCGT GGGCATGAGC TACTGGGGGG CCTACCTGAG GCCGGCAAAA
GCGCCAAAAC CGGTTTAA
|
|---|
| Protein sequence | MSSQRMLIID DEEIVLRSCQ RVFADEGFSV VITQNPAEGL RLASESFFDV ILCDWKMPGF
DGMDVVAELD KRSPESVVVM ISGFPSVGRA TEALKRGAMD YVSKPFTPEE ITAVVQKAVQ
RKLSEEKKAI GRFEKIIGSL QFPVPGIEDK TPKTIAETVA STIGVGKVTS PWRTVTVLGL
LAGAYIGFGG LLSTSVTFDM NAVVGIGLTK FMAGAAFSLG LMLVVIAGAE LFTGNNLMIS
SVLTKDITFI DMIKRWGVVY LANLAGSILI ALILLLSGLW KTGNGALGAA AVNVAVAKVS
LGFGEALVRG VGCNWLVCLA VWMALASSQT IGKIFAIFFP IMGFVAIGFE HCVANMYFIP
AGIFLHHWAD SPAIAAVTTD NLTWFAFLWK NLLPVTIGNI IGGGVFVGMS YWGAYLRPAK
APKPV
|
|---|
| |