Gene Dole_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0851 
Symbol 
ID5693686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp995850 
End bp1000151 
Gene Length4302 bp 
Protein Length1433 aa 
Translation table11 
GC content65% 
IMG OID641263448 
ProductAmylo-alpha-16-glucosidase 
Protein accessionYP_001528738 
Protein GI158520868 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3408] Glycogen debranching enzyme 
TIGRFAM ID[TIGR01561] glycogen debranching enzyme, archaeal type, putative 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.203263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGCA CCGGCTCCGC CATGACCGAC ACACTCCACC TTTCTCAGCA GCCGGCTCCC 
GGCTCCCGCA TGCTGCGGTT CCGGGGCGAT ACCGTGACCT TTGTGCTGGA GCTGTCTGAA
CCGGCCGAGG GTGGCGCATG GATCCGCACC GACATCGGCC ACGGCGCCAT GGTGCGGCGG
GCCGTGATCG ACGCGGTGGA AGCCGATATC CCCCCCCTTG GCAAAGAGTG GTTTGATGTT
CCCATGACCA GGGAGACCGG CACCCGGTTT TCCATCACGC TGCCCCTGGC CGAGGTGGGC
CATTTTGAGG CCAAGTGCTT TTTCATGGCC GCCGGGGAGA CGATTCCGGT ATGGCCGGAA
GGCCCTGACA CGGAGATCAA CGTGGGGCCG GCCGACACCT GCTGTGCCAA CATCATCTAC
AACGCCTTTG TGCGCCAGTT CGGCCCCAAC AAGAGCGGGG CCGGGCAGCC GGACGCGCAC
GACGCGGCCT GCGTCGAACT GCTGGACAAA AAAGACTATA CCGTGATTCC CAAATCCGGC
ACCTTCCGGG ACCTGATCAG CCATCTGGAT TTTATCACCG GCGTGCTGGG GTGCCGGGTG
ATTCACCTGC TGCCCATTCA CCCCACGCCC ACCACCTACG GCCGCATGGG CCGGTTCGGC
AGCCCCTACG CGGCCTTGAG CTTTACCGGG GTGGACCCGG CTCTGGCCGT GTTTGACCCA
AAGGCCACGC CCCTGGAGCA GTTCGCCGAA CTGGTGGACG CCATACACGC CCGCCACGCG
AAGCTGATCC TTGACATCGC GGTCAATCAC ACCGGATGGG CCGCCACCCT GCACGAGACC
CACCCCGAAT GGCTCAAGCG GGACCATGAC GGCGAAATCC AGGTGCCCGG GGCCTGGGGC
GTCACCTGGA GTGACCTGAC CAGCCTGGAC TATTCAAAAA AAGAGTTGTG GCAGTATGTG
GCCGATCTGT TTCTGGCATG GTGCCGCCGG GGTGTGGACG GGTTCCGGTG CGACGCCGGA
TACATGATCC CGGTACCGGC CTGGACCTAT ATCATTGCCG CGGTGCGGGA CCAGTACCCG
GACACGATCT TTTTTTTAGA AGGACTGGGC GGCAAGATAT CGGTGACCCG GGACCTGCTC
AACCGGGCCG ATTTCAACTG GGCCTACTCG GAGTTGTTCC AGAACTACGA CCGGGCACAG
ATCGAACACT ACCTGCCGGA AACCATCGAC ATCTCCCGGA CCGACGGCCT GGCCGTTCAC
TTTGCCGAGA CCCACGACAA CAACCGCCTG GCGGCCCGGT CCTCCGTGTG GGCGAAAATG
CGCACGGCCC TGTGCGCCCT GGCCTCGCAC CACGGGGGTT TTGGTTTTGC CAACGGCGTG
GAGTGGCTGG CCACGGTCAA AATCAATGTC CATGACGCCT GCTCCCTGAA CTGGGGCAAC
CCGGAAAACC AGGCCGACCG TATCCGGCGG CTCAACCTTT TGCTGCGCAC CCATCCGGCC
TTTTTTGAAA AGGTGGAGAT GCACCTGATC GGCCAGGGGC CGGGCAACCA CCTGGTCCTG
CTGCGCCGCC ACGTGCCGTC GGGCAAGGCC CTGATAGTGG CGGCCAACCT GGACGACCGG
CACCCCACAC CCTGCGAATG GACCGCGCCA CCGGACTTTA CCGGCCCCGA TTACATCGAC
CTTTTAACCC AAGCCCCTTT TGCGGTGGCC GTGGAAGGCT CCCGGCATAC CTGCGAACTG
GTGCCGGGGC AGGTGGTGTG CCTGACCACC GACGGCAACG ACCTGCAACT GCTGCAGCAA
CCGGACGACC TCTCTTTTAT TCCGTCGAGA ATTCTGGACC AGCGGCTGCG GGCCAAGGTC
CTGGATATCT TCTGCCATTA CCACAACACG GTAAACGTGG CCGACCTTGA CCTGGCCGGC
CTGGGCCGGC AACTGGCCAA AGACCCGGCG GCCTGCTGCC GCCTTCTGAA CCCGCAAAGC
GATGAACCCC GGGTGGTGCG CTGGCAGTGG CCTGTTGACA CCCGGCGGGA GGTCATGGTG
CCGCCCGGCC ATTTCCTGCT GGTTTCGGCC CCGGCCCCCT TTTGTGCCAC GGTGTCGGAA
ACCGGGCCGG CCGGCCGAAA AACCGTTGGA CGCGAAGAGA GCCTGCCGGC GGCGGACGGC
ACCTTTTTTG CCCTGTTTGC GCCGTGGCCG GAACCCGCGG CACCGGCCCG GCGGACGATC
CACCTGGTGG TGTATGAAAA ACAGGAAAAC CGCCATGCCG AAGGGCACCT GCTTTTTCTG
CGCGACACGC CTGATCCCGT GGTTTCAACA ACTTTCACCC GCACCGACCT GGCCGGCGGC
AACCACCTGC TGCTGTCCAC CAACGGCCGG GGCGGTATGT GCCGGGCCCA CGCGTGGTGG
GGAAGGCTGG CCAGCAAATA CGACGCCCTG CTGGGGGCCA ACCTGAGTCC CGATTTTCCC
GAAGACCGGC GCATCCTGTT TACCCGTTGC CGGGCCTGGG TCGTGTTCCA GGGCTACTCC
CAGAAAATCT GCTTTGACTG CCTGGACACG TTTGCGTATC AGAACAACCG GGGGGTCTGG
ACTTTCAAGG TGCCCACCGG CCAGGGACAG AACATTGACC TGATGATCAC CGTTGCCATG
GTGCCGGGTG AAAACCGGAC CGACATCACC TTTGACCGCC GGCCCGCCGG CGACCACCCG
GAAAAGCTGG CCGACCCGTC ACCGATTCGC CTGATCCTGC GGCCCGACAT CGAGGACCGG
AACTTTCACC AAACCACCAA GGCCTTTGCC GGGCCGGAGC ATGCATGGCC GGCGGCCGTC
ACGGCCCTGG CCGACGGATT TGTCTTTGCC CCGGCCCCGG AACGGCGCCT GACCCTGACG
GTTGCGGGCG GTACCTTTGT GCCCGAGCCC GAGTGGTACT ACATGGTACA CCGGCCCCTG
GAGGCCGACC GGGGCATGGA CCCGTCGTCT GACCTGTTCA GCCCGGGTTA TATCTTTGTC
CCTCTTGAGG GCGGACAAAG CGCCCACCTG ACCGCATCCG CGGAAACAGC GGCCAAAGAG
ACGGCCGATA CGCCTGCCTT GCCGGCCCAT GAACCCGCCG CGTCCGGGGT TGCCGCGGAA
ACACTGGCGC GAACCGCCCT TGATGCCTAC GTGGTGCACC GCACGCCTTT TCTGTCGGTT
ATCGCCGGGT ATCCCTGGTT TCTGGACTGG GGCCGGGACT CGCTGATCTT TACCCGGGGG
CTGATTGCCG CGGACATGAT CCCTGAGGCC CTGGCCGTAC TAAAGCAGTT CGGCCGGTTT
GAAGAGCGCG GCACCCTGCC CAACATGATC GCCGGCGACA ATGCCGGCAA CCGGGACACG
TCGGACGCGC CCCTGTGGTT TATCACGGCC TGCGCCGACC TGGTCCACCG CCATCCGGAC
AAAAACGTTC TGTCCGAACC CTGCGGGGAC CGGACCCTGG CCGAGGTGCT GGTCTCCATC
GGCGAGGCCT ATGTCAGCGG CACCCCCAAC GGCATTCGCG TGGATCCGGC CTCCGGCCTT
GTTTACAGCC CGGCCCATTT TACCTGGATG GACACCGATT TTCCGGCCGC CACCCCCCGG
CAGGGATACT GCATTGAAAT TCAGGCCCTG TGGCACGCGG CCCTGGCCTT TCTGGCCGCC
ATCGACCCGT CGGGCCGCAA CAACTGGAAA GACCTGGCAG GCCGGGTAAA AGAGGCCATC
ACTCAAAAGT TTGTGCTGCC TCAGGGGTAT CTTGCCGACT GTCTTCACGC CCGGACCGGT
GAACCCCCGG AAACCGCCGC GCCCGACGAT GCCCTTCGGC CCAACCAGCT TTTTGCCATT
ACCCTGGGAG CGGTTTCGGA CACGGCCCTT GCCGCCTCCA TTCTGGATGC CTGCCAGGTG
CTGCTGGTGC CCGGCGCCAT TCGCAGCCTG ACCGACGCGC CGGTGGCCCG GCCCCTGGAA
GTTGTTCACC ACGGAAGACG GCTCAACGAT CCTTTTTACC CCTACCAGGG CCATTACACC
GGCGACGAAG ACACCCGCCG CAAGCCCGCC TACCACAACG GCACGGCCTG GACCTGGCCC
TTTCCCGCCT ACTGCGAGGC TTGGGCCATG GTGTACGGGC AGCCGGGAAA GAAAACAGCC
CGGGCACTGA TGAGCGGCAG CCTGGAACTG CTGCGCGCCG GATGCGTGGG CCACTTTCCG
GAAATTGTCG ACGGCGACTG GCCCCACACC CATCGGGGAT GCGACGCCCA GGCCTGGGGG
GCTTCCGAAT GGCTGCGGGT ATGGCGACTT TTACAGGCCT AG
 
Protein sequence
MKGTGSAMTD TLHLSQQPAP GSRMLRFRGD TVTFVLELSE PAEGGAWIRT DIGHGAMVRR 
AVIDAVEADI PPLGKEWFDV PMTRETGTRF SITLPLAEVG HFEAKCFFMA AGETIPVWPE
GPDTEINVGP ADTCCANIIY NAFVRQFGPN KSGAGQPDAH DAACVELLDK KDYTVIPKSG
TFRDLISHLD FITGVLGCRV IHLLPIHPTP TTYGRMGRFG SPYAALSFTG VDPALAVFDP
KATPLEQFAE LVDAIHARHA KLILDIAVNH TGWAATLHET HPEWLKRDHD GEIQVPGAWG
VTWSDLTSLD YSKKELWQYV ADLFLAWCRR GVDGFRCDAG YMIPVPAWTY IIAAVRDQYP
DTIFFLEGLG GKISVTRDLL NRADFNWAYS ELFQNYDRAQ IEHYLPETID ISRTDGLAVH
FAETHDNNRL AARSSVWAKM RTALCALASH HGGFGFANGV EWLATVKINV HDACSLNWGN
PENQADRIRR LNLLLRTHPA FFEKVEMHLI GQGPGNHLVL LRRHVPSGKA LIVAANLDDR
HPTPCEWTAP PDFTGPDYID LLTQAPFAVA VEGSRHTCEL VPGQVVCLTT DGNDLQLLQQ
PDDLSFIPSR ILDQRLRAKV LDIFCHYHNT VNVADLDLAG LGRQLAKDPA ACCRLLNPQS
DEPRVVRWQW PVDTRREVMV PPGHFLLVSA PAPFCATVSE TGPAGRKTVG REESLPAADG
TFFALFAPWP EPAAPARRTI HLVVYEKQEN RHAEGHLLFL RDTPDPVVST TFTRTDLAGG
NHLLLSTNGR GGMCRAHAWW GRLASKYDAL LGANLSPDFP EDRRILFTRC RAWVVFQGYS
QKICFDCLDT FAYQNNRGVW TFKVPTGQGQ NIDLMITVAM VPGENRTDIT FDRRPAGDHP
EKLADPSPIR LILRPDIEDR NFHQTTKAFA GPEHAWPAAV TALADGFVFA PAPERRLTLT
VAGGTFVPEP EWYYMVHRPL EADRGMDPSS DLFSPGYIFV PLEGGQSAHL TASAETAAKE
TADTPALPAH EPAASGVAAE TLARTALDAY VVHRTPFLSV IAGYPWFLDW GRDSLIFTRG
LIAADMIPEA LAVLKQFGRF EERGTLPNMI AGDNAGNRDT SDAPLWFITA CADLVHRHPD
KNVLSEPCGD RTLAEVLVSI GEAYVSGTPN GIRVDPASGL VYSPAHFTWM DTDFPAATPR
QGYCIEIQAL WHAALAFLAA IDPSGRNNWK DLAGRVKEAI TQKFVLPQGY LADCLHARTG
EPPETAAPDD ALRPNQLFAI TLGAVSDTAL AASILDACQV LLVPGAIRSL TDAPVARPLE
VVHHGRRLND PFYPYQGHYT GDEDTRRKPA YHNGTAWTWP FPAYCEAWAM VYGQPGKKTA
RALMSGSLEL LRAGCVGHFP EIVDGDWPHT HRGCDAQAWG ASEWLRVWRL LQA