Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0851 |
Symbol | |
ID | 5693686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 995850 |
End bp | 1000151 |
Gene Length | 4302 bp |
Protein Length | 1433 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641263448 |
Product | Amylo-alpha-16-glucosidase |
Protein accession | YP_001528738 |
Protein GI | 158520868 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3408] Glycogen debranching enzyme |
TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.203263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGCA CCGGCTCCGC CATGACCGAC ACACTCCACC TTTCTCAGCA GCCGGCTCCC GGCTCCCGCA TGCTGCGGTT CCGGGGCGAT ACCGTGACCT TTGTGCTGGA GCTGTCTGAA CCGGCCGAGG GTGGCGCATG GATCCGCACC GACATCGGCC ACGGCGCCAT GGTGCGGCGG GCCGTGATCG ACGCGGTGGA AGCCGATATC CCCCCCCTTG GCAAAGAGTG GTTTGATGTT CCCATGACCA GGGAGACCGG CACCCGGTTT TCCATCACGC TGCCCCTGGC CGAGGTGGGC CATTTTGAGG CCAAGTGCTT TTTCATGGCC GCCGGGGAGA CGATTCCGGT ATGGCCGGAA GGCCCTGACA CGGAGATCAA CGTGGGGCCG GCCGACACCT GCTGTGCCAA CATCATCTAC AACGCCTTTG TGCGCCAGTT CGGCCCCAAC AAGAGCGGGG CCGGGCAGCC GGACGCGCAC GACGCGGCCT GCGTCGAACT GCTGGACAAA AAAGACTATA CCGTGATTCC CAAATCCGGC ACCTTCCGGG ACCTGATCAG CCATCTGGAT TTTATCACCG GCGTGCTGGG GTGCCGGGTG ATTCACCTGC TGCCCATTCA CCCCACGCCC ACCACCTACG GCCGCATGGG CCGGTTCGGC AGCCCCTACG CGGCCTTGAG CTTTACCGGG GTGGACCCGG CTCTGGCCGT GTTTGACCCA AAGGCCACGC CCCTGGAGCA GTTCGCCGAA CTGGTGGACG CCATACACGC CCGCCACGCG AAGCTGATCC TTGACATCGC GGTCAATCAC ACCGGATGGG CCGCCACCCT GCACGAGACC CACCCCGAAT GGCTCAAGCG GGACCATGAC GGCGAAATCC AGGTGCCCGG GGCCTGGGGC GTCACCTGGA GTGACCTGAC CAGCCTGGAC TATTCAAAAA AAGAGTTGTG GCAGTATGTG GCCGATCTGT TTCTGGCATG GTGCCGCCGG GGTGTGGACG GGTTCCGGTG CGACGCCGGA TACATGATCC CGGTACCGGC CTGGACCTAT ATCATTGCCG CGGTGCGGGA CCAGTACCCG GACACGATCT TTTTTTTAGA AGGACTGGGC GGCAAGATAT CGGTGACCCG GGACCTGCTC AACCGGGCCG ATTTCAACTG GGCCTACTCG GAGTTGTTCC AGAACTACGA CCGGGCACAG ATCGAACACT ACCTGCCGGA AACCATCGAC ATCTCCCGGA CCGACGGCCT GGCCGTTCAC TTTGCCGAGA CCCACGACAA CAACCGCCTG GCGGCCCGGT CCTCCGTGTG GGCGAAAATG CGCACGGCCC TGTGCGCCCT GGCCTCGCAC CACGGGGGTT TTGGTTTTGC CAACGGCGTG GAGTGGCTGG CCACGGTCAA AATCAATGTC CATGACGCCT GCTCCCTGAA CTGGGGCAAC CCGGAAAACC AGGCCGACCG TATCCGGCGG CTCAACCTTT TGCTGCGCAC CCATCCGGCC TTTTTTGAAA AGGTGGAGAT GCACCTGATC GGCCAGGGGC CGGGCAACCA CCTGGTCCTG CTGCGCCGCC ACGTGCCGTC GGGCAAGGCC CTGATAGTGG CGGCCAACCT GGACGACCGG CACCCCACAC CCTGCGAATG GACCGCGCCA CCGGACTTTA CCGGCCCCGA TTACATCGAC CTTTTAACCC AAGCCCCTTT TGCGGTGGCC GTGGAAGGCT CCCGGCATAC CTGCGAACTG GTGCCGGGGC AGGTGGTGTG CCTGACCACC GACGGCAACG ACCTGCAACT GCTGCAGCAA CCGGACGACC TCTCTTTTAT TCCGTCGAGA ATTCTGGACC AGCGGCTGCG GGCCAAGGTC CTGGATATCT TCTGCCATTA CCACAACACG GTAAACGTGG CCGACCTTGA CCTGGCCGGC CTGGGCCGGC AACTGGCCAA AGACCCGGCG GCCTGCTGCC GCCTTCTGAA CCCGCAAAGC GATGAACCCC GGGTGGTGCG CTGGCAGTGG CCTGTTGACA CCCGGCGGGA GGTCATGGTG CCGCCCGGCC ATTTCCTGCT GGTTTCGGCC CCGGCCCCCT TTTGTGCCAC GGTGTCGGAA ACCGGGCCGG CCGGCCGAAA AACCGTTGGA CGCGAAGAGA GCCTGCCGGC GGCGGACGGC ACCTTTTTTG CCCTGTTTGC GCCGTGGCCG GAACCCGCGG CACCGGCCCG GCGGACGATC CACCTGGTGG TGTATGAAAA ACAGGAAAAC CGCCATGCCG AAGGGCACCT GCTTTTTCTG CGCGACACGC CTGATCCCGT GGTTTCAACA ACTTTCACCC GCACCGACCT GGCCGGCGGC AACCACCTGC TGCTGTCCAC CAACGGCCGG GGCGGTATGT GCCGGGCCCA CGCGTGGTGG GGAAGGCTGG CCAGCAAATA CGACGCCCTG CTGGGGGCCA ACCTGAGTCC CGATTTTCCC GAAGACCGGC GCATCCTGTT TACCCGTTGC CGGGCCTGGG TCGTGTTCCA GGGCTACTCC CAGAAAATCT GCTTTGACTG CCTGGACACG TTTGCGTATC AGAACAACCG GGGGGTCTGG ACTTTCAAGG TGCCCACCGG CCAGGGACAG AACATTGACC TGATGATCAC CGTTGCCATG GTGCCGGGTG AAAACCGGAC CGACATCACC TTTGACCGCC GGCCCGCCGG CGACCACCCG GAAAAGCTGG CCGACCCGTC ACCGATTCGC CTGATCCTGC GGCCCGACAT CGAGGACCGG AACTTTCACC AAACCACCAA GGCCTTTGCC GGGCCGGAGC ATGCATGGCC GGCGGCCGTC ACGGCCCTGG CCGACGGATT TGTCTTTGCC CCGGCCCCGG AACGGCGCCT GACCCTGACG GTTGCGGGCG GTACCTTTGT GCCCGAGCCC GAGTGGTACT ACATGGTACA CCGGCCCCTG GAGGCCGACC GGGGCATGGA CCCGTCGTCT GACCTGTTCA GCCCGGGTTA TATCTTTGTC CCTCTTGAGG GCGGACAAAG CGCCCACCTG ACCGCATCCG CGGAAACAGC GGCCAAAGAG ACGGCCGATA CGCCTGCCTT GCCGGCCCAT GAACCCGCCG CGTCCGGGGT TGCCGCGGAA ACACTGGCGC GAACCGCCCT TGATGCCTAC GTGGTGCACC GCACGCCTTT TCTGTCGGTT ATCGCCGGGT ATCCCTGGTT TCTGGACTGG GGCCGGGACT CGCTGATCTT TACCCGGGGG CTGATTGCCG CGGACATGAT CCCTGAGGCC CTGGCCGTAC TAAAGCAGTT CGGCCGGTTT GAAGAGCGCG GCACCCTGCC CAACATGATC GCCGGCGACA ATGCCGGCAA CCGGGACACG TCGGACGCGC CCCTGTGGTT TATCACGGCC TGCGCCGACC TGGTCCACCG CCATCCGGAC AAAAACGTTC TGTCCGAACC CTGCGGGGAC CGGACCCTGG CCGAGGTGCT GGTCTCCATC GGCGAGGCCT ATGTCAGCGG CACCCCCAAC GGCATTCGCG TGGATCCGGC CTCCGGCCTT GTTTACAGCC CGGCCCATTT TACCTGGATG GACACCGATT TTCCGGCCGC CACCCCCCGG CAGGGATACT GCATTGAAAT TCAGGCCCTG TGGCACGCGG CCCTGGCCTT TCTGGCCGCC ATCGACCCGT CGGGCCGCAA CAACTGGAAA GACCTGGCAG GCCGGGTAAA AGAGGCCATC ACTCAAAAGT TTGTGCTGCC TCAGGGGTAT CTTGCCGACT GTCTTCACGC CCGGACCGGT GAACCCCCGG AAACCGCCGC GCCCGACGAT GCCCTTCGGC CCAACCAGCT TTTTGCCATT ACCCTGGGAG CGGTTTCGGA CACGGCCCTT GCCGCCTCCA TTCTGGATGC CTGCCAGGTG CTGCTGGTGC CCGGCGCCAT TCGCAGCCTG ACCGACGCGC CGGTGGCCCG GCCCCTGGAA GTTGTTCACC ACGGAAGACG GCTCAACGAT CCTTTTTACC CCTACCAGGG CCATTACACC GGCGACGAAG ACACCCGCCG CAAGCCCGCC TACCACAACG GCACGGCCTG GACCTGGCCC TTTCCCGCCT ACTGCGAGGC TTGGGCCATG GTGTACGGGC AGCCGGGAAA GAAAACAGCC CGGGCACTGA TGAGCGGCAG CCTGGAACTG CTGCGCGCCG GATGCGTGGG CCACTTTCCG GAAATTGTCG ACGGCGACTG GCCCCACACC CATCGGGGAT GCGACGCCCA GGCCTGGGGG GCTTCCGAAT GGCTGCGGGT ATGGCGACTT TTACAGGCCT AG
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Protein sequence | MKGTGSAMTD TLHLSQQPAP GSRMLRFRGD TVTFVLELSE PAEGGAWIRT DIGHGAMVRR AVIDAVEADI PPLGKEWFDV PMTRETGTRF SITLPLAEVG HFEAKCFFMA AGETIPVWPE GPDTEINVGP ADTCCANIIY NAFVRQFGPN KSGAGQPDAH DAACVELLDK KDYTVIPKSG TFRDLISHLD FITGVLGCRV IHLLPIHPTP TTYGRMGRFG SPYAALSFTG VDPALAVFDP KATPLEQFAE LVDAIHARHA KLILDIAVNH TGWAATLHET HPEWLKRDHD GEIQVPGAWG VTWSDLTSLD YSKKELWQYV ADLFLAWCRR GVDGFRCDAG YMIPVPAWTY IIAAVRDQYP DTIFFLEGLG GKISVTRDLL NRADFNWAYS ELFQNYDRAQ IEHYLPETID ISRTDGLAVH FAETHDNNRL AARSSVWAKM RTALCALASH HGGFGFANGV EWLATVKINV HDACSLNWGN PENQADRIRR LNLLLRTHPA FFEKVEMHLI GQGPGNHLVL LRRHVPSGKA LIVAANLDDR HPTPCEWTAP PDFTGPDYID LLTQAPFAVA VEGSRHTCEL VPGQVVCLTT DGNDLQLLQQ PDDLSFIPSR ILDQRLRAKV LDIFCHYHNT VNVADLDLAG LGRQLAKDPA ACCRLLNPQS DEPRVVRWQW PVDTRREVMV PPGHFLLVSA PAPFCATVSE TGPAGRKTVG REESLPAADG TFFALFAPWP EPAAPARRTI HLVVYEKQEN RHAEGHLLFL RDTPDPVVST TFTRTDLAGG NHLLLSTNGR GGMCRAHAWW GRLASKYDAL LGANLSPDFP EDRRILFTRC RAWVVFQGYS QKICFDCLDT FAYQNNRGVW TFKVPTGQGQ NIDLMITVAM VPGENRTDIT FDRRPAGDHP EKLADPSPIR LILRPDIEDR NFHQTTKAFA GPEHAWPAAV TALADGFVFA PAPERRLTLT VAGGTFVPEP EWYYMVHRPL EADRGMDPSS DLFSPGYIFV PLEGGQSAHL TASAETAAKE TADTPALPAH EPAASGVAAE TLARTALDAY VVHRTPFLSV IAGYPWFLDW GRDSLIFTRG LIAADMIPEA LAVLKQFGRF EERGTLPNMI AGDNAGNRDT SDAPLWFITA CADLVHRHPD KNVLSEPCGD RTLAEVLVSI GEAYVSGTPN GIRVDPASGL VYSPAHFTWM DTDFPAATPR QGYCIEIQAL WHAALAFLAA IDPSGRNNWK DLAGRVKEAI TQKFVLPQGY LADCLHARTG EPPETAAPDD ALRPNQLFAI TLGAVSDTAL AASILDACQV LLVPGAIRSL TDAPVARPLE VVHHGRRLND PFYPYQGHYT GDEDTRRKPA YHNGTAWTWP FPAYCEAWAM VYGQPGKKTA RALMSGSLEL LRAGCVGHFP EIVDGDWPHT HRGCDAQAWG ASEWLRVWRL LQA
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