Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0837 |
Symbol | |
ID | 5693672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 970901 |
End bp | 971638 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641263434 |
Product | ABC transporter-related protein |
Protein accession | YP_001528724 |
Protein GI | 158520854 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCGAA TTCAGAACAT CAACAGCTAC TACGGCCTGG CCCATGTGTT GAAGAATGTG TCGCTTCACA TCAACAGGGG TGAAACCGTT ACCCTGATCG GCGCCAACGG CGCGGGCAAG ACCACCCTGC TGCGCTCCAT CAGCGGGCTT CAGGCGATTC GGGGTGGCAA GGTGTTTTTG GAGGGAAAAG AGATCACCCA GGTGCCGGTT GAAAAAAAGG TCCGCATGGG CATTGCCCAG GTGCCGGAAG GGCGCCAGAT CTTCTGGCCC ATGACCGTTT TTGAAAACCT GGAGATGGGC GGGTTCCTGG TTTACAAGAT GCACGGCCGC CGTCAGCTGA TTGCCACCAT AGAAGAGATG TTCGATGTCT TTCCGGTGCT GCGGAATCGC CGGAAGCAGT ATGCCGGCTC CCTGAGCGGC GGCGAACAGC AGATGCTGGC CATTGCCATG GCCCTGATGC TGCGGCCCCG GCTGCTGCTG CTGGACGAGC CGTCCATGGG CCTGGCCCCG CTGATTGTGC GGGAGATATT CCAGATTCTG GACCGGCTGA AAAAGGAGAA CGACCTGACC GTGCTGCTGG TGGAGCAGAA CGCCCGGGTG GCGTTGAATT TTGCCGACCG CGGCTACGTG ATGGAGACCG GCCGGATCAT TCTGGAGGAT TCGGCATCGG CCCTGCTGGC CAACCAGGAG GTCAAGCGGG CCTACCTGGG CAGGGACCAG AAAGAGATAT GGGAGTAG
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Protein sequence | MLRIQNINSY YGLAHVLKNV SLHINRGETV TLIGANGAGK TTLLRSISGL QAIRGGKVFL EGKEITQVPV EKKVRMGIAQ VPEGRQIFWP MTVFENLEMG GFLVYKMHGR RQLIATIEEM FDVFPVLRNR RKQYAGSLSG GEQQMLAIAM ALMLRPRLLL LDEPSMGLAP LIVREIFQIL DRLKKENDLT VLLVEQNARV ALNFADRGYV METGRIILED SASALLANQE VKRAYLGRDQ KEIWE
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