Gene Dole_0834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0834 
Symbol 
ID5693669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp967924 
End bp968826 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content59% 
IMG OID641263431 
Productinner-membrane translocator 
Protein accessionYP_001528721 
Protein GI158520851 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000998369 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTAA GCGGGCCTTT TTCGGATTTT CTGCAGTTCC TCTTCATGGG GGTTCAGCGG 
GGCTGCATCT ACGCCATGGT GGCCATGGGG TTTAACATCA TTTACAACTC CACCGGCATC
ATCAACTTCG CGCAGGGGGA GTTCGTTGTG CTGGGCGGCC TGATGATGGT CACCCTGACA
ATGGCCTCTC ACCTGCCCAT GCCCGTGGCC TTTCTGCTGA CCGCTGTTTT TGTCATGGCG
GTGGGCGTCC TGATGGAGCG GACCACCATC AACCCGGTGA AGAACCCCTC GGTGCTGCGG
CTGATCATCA TCACCATCGC GGTTTCCATC CTGATTCGCG GTATTGCCAT GCTGGTCTGG
GGCAAGGAGT CCCACCACAT GCGCCACTTT TCCAGCGAAG AGAGTATTAA TGTGCTGGGC
GCCACGATTC TTCCCCAGAC GCTGTGGATT ATCGGCATGC TGGTTGTGAC CGTGGGCGTG
TTTGTCTATT TTTTCAATTA CACCATGACC GGTAAAAGCA TGCGGGCCTG CGCCATCAAC
CGGGACGCGG CCCGCCTGGC CGGGATCAAC GACCGGAAAA TGATCATGCT GTCCTTTGCC
CTTTCCGCCG GTATCGGGGC CATTGCCGGC ATCATCATCA CGCCGGTGAT CCAGATGGAT
TATGCCCGGG GCGCGCTGCT GGGCCTCAAG GGGTTTGGTG CCGCCGTGGT GGGCGGCCTG
GGAAACAGTT TTGGCGCCGT GGCCGCGGGC CTGCTGCTGG GCATTATCGA GGCCATGGCC
GCGGGATACA TCTCCTCTCA CTACATGGAC GCCGCGGCCC TTTTTATCCT GCTGATTGTC
CTGTTTGTCC GCCCCAGCGG ACTTTTCGGC AACCGGGAGG CGGCCAGATT TAAAGAATTT
TAA
 
Protein sequence
MDVSGPFSDF LQFLFMGVQR GCIYAMVAMG FNIIYNSTGI INFAQGEFVV LGGLMMVTLT 
MASHLPMPVA FLLTAVFVMA VGVLMERTTI NPVKNPSVLR LIIITIAVSI LIRGIAMLVW
GKESHHMRHF SSEESINVLG ATILPQTLWI IGMLVVTVGV FVYFFNYTMT GKSMRACAIN
RDAARLAGIN DRKMIMLSFA LSAGIGAIAG IIITPVIQMD YARGALLGLK GFGAAVVGGL
GNSFGAVAAG LLLGIIEAMA AGYISSHYMD AAALFILLIV LFVRPSGLFG NREAARFKEF