Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0834 |
Symbol | |
ID | 5693669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 967924 |
End bp | 968826 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641263431 |
Product | inner-membrane translocator |
Protein accession | YP_001528721 |
Protein GI | 158520851 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000998369 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTAA GCGGGCCTTT TTCGGATTTT CTGCAGTTCC TCTTCATGGG GGTTCAGCGG GGCTGCATCT ACGCCATGGT GGCCATGGGG TTTAACATCA TTTACAACTC CACCGGCATC ATCAACTTCG CGCAGGGGGA GTTCGTTGTG CTGGGCGGCC TGATGATGGT CACCCTGACA ATGGCCTCTC ACCTGCCCAT GCCCGTGGCC TTTCTGCTGA CCGCTGTTTT TGTCATGGCG GTGGGCGTCC TGATGGAGCG GACCACCATC AACCCGGTGA AGAACCCCTC GGTGCTGCGG CTGATCATCA TCACCATCGC GGTTTCCATC CTGATTCGCG GTATTGCCAT GCTGGTCTGG GGCAAGGAGT CCCACCACAT GCGCCACTTT TCCAGCGAAG AGAGTATTAA TGTGCTGGGC GCCACGATTC TTCCCCAGAC GCTGTGGATT ATCGGCATGC TGGTTGTGAC CGTGGGCGTG TTTGTCTATT TTTTCAATTA CACCATGACC GGTAAAAGCA TGCGGGCCTG CGCCATCAAC CGGGACGCGG CCCGCCTGGC CGGGATCAAC GACCGGAAAA TGATCATGCT GTCCTTTGCC CTTTCCGCCG GTATCGGGGC CATTGCCGGC ATCATCATCA CGCCGGTGAT CCAGATGGAT TATGCCCGGG GCGCGCTGCT GGGCCTCAAG GGGTTTGGTG CCGCCGTGGT GGGCGGCCTG GGAAACAGTT TTGGCGCCGT GGCCGCGGGC CTGCTGCTGG GCATTATCGA GGCCATGGCC GCGGGATACA TCTCCTCTCA CTACATGGAC GCCGCGGCCC TTTTTATCCT GCTGATTGTC CTGTTTGTCC GCCCCAGCGG ACTTTTCGGC AACCGGGAGG CGGCCAGATT TAAAGAATTT TAA
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Protein sequence | MDVSGPFSDF LQFLFMGVQR GCIYAMVAMG FNIIYNSTGI INFAQGEFVV LGGLMMVTLT MASHLPMPVA FLLTAVFVMA VGVLMERTTI NPVKNPSVLR LIIITIAVSI LIRGIAMLVW GKESHHMRHF SSEESINVLG ATILPQTLWI IGMLVVTVGV FVYFFNYTMT GKSMRACAIN RDAARLAGIN DRKMIMLSFA LSAGIGAIAG IIITPVIQMD YARGALLGLK GFGAAVVGGL GNSFGAVAAG LLLGIIEAMA AGYISSHYMD AAALFILLIV LFVRPSGLFG NREAARFKEF
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