Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0824 |
Symbol | |
ID | 5693659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 954240 |
End bp | 956591 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641263421 |
Product | EcoEI R domain-containing protein |
Protein accession | YP_001528711 |
Protein GI | 158520841 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATAAAA GCGAAAAGAA AAAACTCAGC GAAACAGATA TCTGTGATCT GTTCATCACC CCGGCGATTA AAAATGCAGG GTGGGACCCT ATTCGGCAGA TTCGTCGGGA GGTAACGCTC TCTCCCGGTC CGGTTGTTGT GCGGGGCAAC ATGTCCTCGC GCAACAAGAA AAAGAAAAAA TTTGCCGACT ATGTCCTAGC CTGGGAGCCG GGCGTTCCCG TGGCGGTCGT GGAAGCCAAA GCAAACGATC ACACCGTCAG CCAGGGCCTA CAACAGGCCC TGGGCTACGC CGAGATATTA CAGGTGCCCA GCGCCTTCAG TTCCAACGGC GATGCCTTTG CCTCCCACAA CAAAGTTCCG GCCACCGGTG AAGAAATTGA AACCCAGCTT CCCCTTGACC AGTTCCCGCC GCCGCCCACT CTCTGGCAGC GCTATAAAAC CTATCGCAAT ATTGAAGACG CCTCGGACGA CTTGCTTCTG CAGCCCTATC ATTTCGACGC CACGGAAAAA GAACCCCGCT ATTATCAGGT CGAAGCCATC AACCGGGTCA TTGAAGCCGT TGCCAAAGGC AACCGGCGGA TGCTGCTGGT CATGGCCACC GGCACCGGCA AAACCTACAC CACCTTTCAG ATCATCTGGC GGCTGTGGCA GGCCAGGGCC GTAAAGCGCG TCCTGTTTCT GGTGGACCGA AATATCCTGG CCGACCAAAC CCTGGTCAAC GACTTCAAAC CCTTCGGCTC GGTCATGACC AAGGTGAAAA ACCGAAAAAT TGATCCAGCC TATGAAATTC ATCTGGCCCT TTACCAAGCC ATCACCGGCC CGGACGAAGC AGACAAAATT TTTAAAAGCG TTACCCCTGA CTTTTTCGAC ATGGTCGTTA TTGATGAATG CCATCGTGGC AGCGCCGCTG AAGACTCCGA CTGGCATGAA ATCCTCAATT ACTTTTCCGG CGCCATCCAA CTGGGCCTTA CCGCCACCCC CCGGGAAACA AAATATGTCT CCAATATCTC CTATTTCGGT GAGCCGATTT ACACCTACAG CTTAAAGCAG GGCATTCAGG ACGGCTTTTT AGCGCCCTAT AAAGTGGTGC GCATCGACAT AGACAAAGAC ATCCGTGGCT GGACGCCGCC GCCCGGTATG GTAGACGATC TCGGCCAGGC AATTGAACAT CGCACTTACA ACCAGAAGGA CATGGATCGC ATTCTCGTGC TCAACCAGCG CACCAAGCTG GTTGCCAAGC GCGTTATGCA GCTTCTTCGC GCCACCGATC CGTTTTCCAA AACCATCATC TTTTGTGAAG ACATCGACCA TGCCGAGCGC ATGCGCAAGG CCATTGTTAA TGCCGCCGGC CAACTGGCCA TCGACAACGC CAAATATGTT ATGCGGATTA CCGGCGACAG CCCCGAAGGT AAGGCCGAGC TGGACAACTT TATCGACCCG GAAAACCCTT TCCCCGTTAT TGCCACCACC TCGGACCTTC TCACTACCGG GGTAGACGCC AAGACCTGCA AACTCATCGT ATTAGACAAA ACCATCCACT CCATGACCAC TTTTAAGCAG ATTATCGGCC GGGGCACACG CATCGATGAA GACAACAATA AATGGTTTTT CACCATCATG GATTTTAAAA AAGCCACCAA ACTGTTTGCC GATCCGGAAT TCGACGGTGA GCCGGTGGTG ATTTACGAGC CCGACGATGA CGACCCCCCG GTCCCGCCTG ATCCAAAACC GGATGATGAC GATGACGGTA CCATCGAAGA CCCCGGGCCG GGCATCCAAA AGTTTGTGGT AAACGGCGTA CCGGTCAGCA TCATTGCCGA GCGCGTCGAA TACTACGGCC CGGACGGCGA CCTCATCACA GAGTCCTACC GCGACTTTAC CCGCAAGCAG ATCCACCAGG AATTTACTTC GTTAGATGAA TTTCTTGCGC GCTGGAACGC GGCTGAAAAA AAGCAGGCCA TTATCGATCT GCTGGAAGAA CACGGCATTA TTCTGGAAAA CCTGGCCGAA GAAGTGGGTA AGGATTTCGG CGACTTTGAC CTTATCTGCC ATATCGCCTT TGACCAACCG CCGCTTACCC GTAAAGAACG GGCCAACAAT GTAAAAAAGC GAAACTACTT CACCAAATAT GGCGAGCAGG TCCGGGCCGT GCTGGCCGCC CTGTTGGACA AATACGCCGA CGAAGGCATC CGCACGCTTG AGAACGCCAA GGTGCTTAAA ATGAAGCCCT TCAGCGACAT GGGCACCCCC ATGGAGATCA TCAACACTGT TTTTGGCGGC AAAGCCAATT ATGACAATGC CATTGCCGAA CTGGAAAAAG AACTGTTTAT TAATACGGAG CAGCGAGCAT GA
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Protein sequence | MDKSEKKKLS ETDICDLFIT PAIKNAGWDP IRQIRREVTL SPGPVVVRGN MSSRNKKKKK FADYVLAWEP GVPVAVVEAK ANDHTVSQGL QQALGYAEIL QVPSAFSSNG DAFASHNKVP ATGEEIETQL PLDQFPPPPT LWQRYKTYRN IEDASDDLLL QPYHFDATEK EPRYYQVEAI NRVIEAVAKG NRRMLLVMAT GTGKTYTTFQ IIWRLWQARA VKRVLFLVDR NILADQTLVN DFKPFGSVMT KVKNRKIDPA YEIHLALYQA ITGPDEADKI FKSVTPDFFD MVVIDECHRG SAAEDSDWHE ILNYFSGAIQ LGLTATPRET KYVSNISYFG EPIYTYSLKQ GIQDGFLAPY KVVRIDIDKD IRGWTPPPGM VDDLGQAIEH RTYNQKDMDR ILVLNQRTKL VAKRVMQLLR ATDPFSKTII FCEDIDHAER MRKAIVNAAG QLAIDNAKYV MRITGDSPEG KAELDNFIDP ENPFPVIATT SDLLTTGVDA KTCKLIVLDK TIHSMTTFKQ IIGRGTRIDE DNNKWFFTIM DFKKATKLFA DPEFDGEPVV IYEPDDDDPP VPPDPKPDDD DDGTIEDPGP GIQKFVVNGV PVSIIAERVE YYGPDGDLIT ESYRDFTRKQ IHQEFTSLDE FLARWNAAEK KQAIIDLLEE HGIILENLAE EVGKDFGDFD LICHIAFDQP PLTRKERANN VKKRNYFTKY GEQVRAVLAA LLDKYADEGI RTLENAKVLK MKPFSDMGTP MEIINTVFGG KANYDNAIAE LEKELFINTE QRA
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