Gene Dole_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0819 
Symbol 
ID5693654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp946436 
End bp947671 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content61% 
IMG OID641263416 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001528706 
Protein GI158520836 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTATT TTGAACTGGA CCTGTCGATT CCCGGGGATG TTAAGGCCAT CACAAGGGAA 
GTGCGGCCGT TTGCGAAAAA GCGGTTGCGG CCGGCCGGCA TCGAGCTGGA CAACCTGCAT
GACCCGGCAG CCGTATGTGC CGTCAACTCC GTCATCCGGG ACGTTTTCAA AGCTTACCGG
AAACTGGGCC TGCATGTACT GGACATTCCC AAACAGGCGG GCGGCATGGC CGGTGAACTG
CACCATAAAG CCGGCCCCAT TATTGTCGAG GAAATGGGCC AGGGGGACGC CGGCCTGGCC
GTCAGTATGG AAGTATCCAA CCTGCCGTTC GTACTGGCGG CCATGTCTTC GCAGCCGGTG
TTGCAGGAAC TGGCCAAAGC CTATTGCGCG GACACCGATG CCCGGATGAT CGGCTGCTGG
GCAATGCCGG ACGCCGGGGA TTACCTGGAC TGGCTGTTGC CGGGCAACGG GGCGGACAGC
CATACGCCTC ATACGCCCGG GTTAGCGTCG ATATCGCGGG AAGACGGATA CGTCATCAAC
GGAGAAATAA CAGCATGGAT CGCCAATGCC CCCATGGCCA CCCACGCGGC GGTCCTGGTC
AGCCTGGACC CGTCCCGGGG CATACCCGGG TGCGGGGTGG CCATCGTTCC CCTTGACCTT
CCCGGCATCA CTGTCAGCAA CCCCCTGGAC CGGATCGGCC AGCGCACCCT GCCAAGAAGC
CGGATCTCTT TTAAAGACGT GAAAATTCCG TTCACACTCA TGGCGGTTTC CGACATGGAA
AAGGCCCGGC CGCAAATGAC AGGCATGCTG GCCCGGACAA ACAACATCAT CGCCGCGGCT
TCGGTGGGCC TGGCCCAGGC CGCCTATGAC GAGGCCATAC ATTACGCCAA ACAGCGGGTG
CAGGGCGGGG TCCCCATATT CACGCACAAA AATATCAAGT TACAGCTTTT TAACATGTTT
ACAAAAGTGG AAACCGCCCG GGCCTACAGC CGCCGGGTCG GGAATTATAA CCGGACCGCG
GAGTCCGCGT CCCTGCATCA CTCCCTGGCC GCCAAAGTTT TTTGCACCCG CACGGCTTTC
GATGTGGCCA GCGACGCCAT CGCCATATTC GGCGGCAACG GCCTGACCAG GGAGTACCCG
GTTGAAAAAA TGTTCCGGGA CGCCCGGGTG GCCATGCTCA GCGACGGGGA GAACAACACC
CTGTCCATCA CCGCGGCCGG TGAACTGGCC AGGTAA
 
Protein sequence
MGYFELDLSI PGDVKAITRE VRPFAKKRLR PAGIELDNLH DPAAVCAVNS VIRDVFKAYR 
KLGLHVLDIP KQAGGMAGEL HHKAGPIIVE EMGQGDAGLA VSMEVSNLPF VLAAMSSQPV
LQELAKAYCA DTDARMIGCW AMPDAGDYLD WLLPGNGADS HTPHTPGLAS ISREDGYVIN
GEITAWIANA PMATHAAVLV SLDPSRGIPG CGVAIVPLDL PGITVSNPLD RIGQRTLPRS
RISFKDVKIP FTLMAVSDME KARPQMTGML ARTNNIIAAA SVGLAQAAYD EAIHYAKQRV
QGGVPIFTHK NIKLQLFNMF TKVETARAYS RRVGNYNRTA ESASLHHSLA AKVFCTRTAF
DVASDAIAIF GGNGLTREYP VEKMFRDARV AMLSDGENNT LSITAAGELA R