Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0790 |
Symbol | |
ID | 5693625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 917745 |
End bp | 919823 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641263387 |
Product | two component regulator propeller domain-containing protein |
Protein accession | YP_001528677 |
Protein GI | 158520807 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3292] Predicted periplasmic ligand-binding sensor domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA TTGCCCCCAC CCATTCCTGT CATGCCGCCG TGGCCGCACT GCTTCTGGCC CTTTTTCTGA CGCCCGTAAC AGCCCCTGAC GCTCAGGCCG CCGAATGGGT AAACTACCCC AGGCAGCCGG ACATCATCTA TTACCTGGCC ATTGAGCCGG TCACGGACAC GGACTACTAT GTCTGGGCCG GCACGGAAAC CGGCGCGTTT CGTATTCACG CGGTAGACGA CACCTATGTG CGATACACCT ATGCCGACGG CCTGTCTTAC AACTCGGTCA AATCCATTCT GGTGGACAGT GCCGGCGACA AGTGGTTCGG CACCATGAAC GGCGGGCTGA ACCATTTTGA CGACACCACC TGGACCCTGT TTCCCAGCCC GGATATCACG CCCATCAATG AAATCGCCCT TAACGGACTG GGATTTCCCC TGCTGGCCAG GGGTGATTTT TTAACAGAGC TTGCGGGCCT GGGCGGGTTT CATGTATTTA ACGGCGCCGA CTGGGCCGTC TATAACGCAG GCAACAGCGA CCTGGCAGCA AATTACGTGG AGGCCCTGCT GGTCGACGGT TCGGGAAACG TGTGGCTGGG CACCTGCCCG CCGCCCCTTG GTTTTCTGGT CGGCCAGCCC GGGGGCCTGA ACATGTTTGA TGGCACGAAC TGGACCACCT ATGACAAATC CGACGGCCTG GTCGAGGAAA ATGTTTCTGA CATTGCCGCC GACAGCAGCG GAGACCTCTG GATCGCCACC CTGTTCGGCG GCATCAGCCA TTTTGACGGC GCCACATGGA CATCCTACAC CACCGCCAAC AGCGACCTGC CCAACGGCAA CGTTCAGGCC GTGGCCGTTG ACGCCAATGA CACCAAGTGG TTCGGCACCA CCATGGCCGG TGTCTGCTCC TTTGACGGTT TTGCCTGGAC CCCCTACGAC ACGGACAACA GCGGTCTTGT CAACAACAAC ATTCACGCCA TTGCCCTGCA CGACACGCCC CCGCCCACTG AAGCGGCATC CGGAACCGAT CCGATTGCCA GGGTCGTTGT TCCGGTATTT GAACCCGATG TCTGGCTGGG CACGGGCAAT GGGGTCAACC GTCTGGACAG CACCGGGGCC TGGACCACCT TTTCCTTTGA CGGCATCTTT AACTCCTATT ACACGGCCGC GGCCGCGGAT GCCGGCGGCA ACAAGTGGTT CGGCACCCAC GACGGCGTCG TAATGTTTGA CGATACCGAC TGGACCACTT ACACCACCGA AAACAGCGGT CTTGCGGGAA ACAACATTCG GGCCATTATC GTATCCAGCG ACGGGAATAT CTGGTTTGCC ACCAACGCCG GGGCAAGCTG GTTTGACGGT ACCGACTGGG CCACCTACAA CACCGGCAAC AGCGGCCTTG TCTCTGACGG GGTTTCCTGT CTGGCCGAAG ATATCTCCGG CAGCCTCTGG TTTGGCACCA GCGCCGGGGC AAGCGTGTTT GACGGCACCA CATGGACCAC CTATACCATC ACCAACAGCG ACCTGGTTTC CGACGCTGTG CAGGCGGTCT GCGCCGCCGG TGACGGCAGC CTGTGGTTCG GCACCGACGC CGGTGTCAGT GTGTTTGATG GCGGCACATG GACCACCTAT ACCACCGCCA ACAGTGACCT GGTGGCCGAC GATATCAACA CCATTGTCGA AAGCAGCACC GGCCTCATAG GAATCGGCAC CGATTCAGGA ATGAGCATGT TTGACGGCGG CACATGGACC ACGCTTGACG TGGCAGGCGG CAGCCTGATC GCAAACACGG TCCGGGCCAT TATCGAGGAC AGCGAAGGCG AAATCTGGGT GGGCACCACG GCCGGCGTCA GCCGGTTTGA CGGCGCTGCC TGGAGTCACT ACGACAGGGG CGACGGCCCG GGCGATCCCA GCATTCGGGC CATGGCCCTT GAATCCGACG GCGACCTCTG GTTTGCCACG GGCAACGGGG TCACCGGTTA TGTCATTCCC CCGGAGCCGG AGCCCGAGCC TGAACCGGAG CCCGTACCGG ACCCGCCCCT GGTGCCGGAC ACCTCGATCG GCTGCTTTAT CACCGGGCTC ATGCGGTAG
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Protein sequence | MKTIAPTHSC HAAVAALLLA LFLTPVTAPD AQAAEWVNYP RQPDIIYYLA IEPVTDTDYY VWAGTETGAF RIHAVDDTYV RYTYADGLSY NSVKSILVDS AGDKWFGTMN GGLNHFDDTT WTLFPSPDIT PINEIALNGL GFPLLARGDF LTELAGLGGF HVFNGADWAV YNAGNSDLAA NYVEALLVDG SGNVWLGTCP PPLGFLVGQP GGLNMFDGTN WTTYDKSDGL VEENVSDIAA DSSGDLWIAT LFGGISHFDG ATWTSYTTAN SDLPNGNVQA VAVDANDTKW FGTTMAGVCS FDGFAWTPYD TDNSGLVNNN IHAIALHDTP PPTEAASGTD PIARVVVPVF EPDVWLGTGN GVNRLDSTGA WTTFSFDGIF NSYYTAAAAD AGGNKWFGTH DGVVMFDDTD WTTYTTENSG LAGNNIRAII VSSDGNIWFA TNAGASWFDG TDWATYNTGN SGLVSDGVSC LAEDISGSLW FGTSAGASVF DGTTWTTYTI TNSDLVSDAV QAVCAAGDGS LWFGTDAGVS VFDGGTWTTY TTANSDLVAD DINTIVESST GLIGIGTDSG MSMFDGGTWT TLDVAGGSLI ANTVRAIIED SEGEIWVGTT AGVSRFDGAA WSHYDRGDGP GDPSIRAMAL ESDGDLWFAT GNGVTGYVIP PEPEPEPEPE PVPDPPLVPD TSIGCFITGL MR
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