| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0775 |
|---|
| Symbol | |
|---|
| ID | 5693610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 900363 |
|---|
| End bp | 901964 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641263372 |
|---|
| Product | carbohydrate kinase, YjeF related protein |
|---|
| Protein accession | YP_001528662 |
|---|
| Protein GI | 158520792 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00360184 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACCTTG TGTGCGCCGA CGAGATGCGG CAGATGGACC GCACCACCAT CGAAGCCTTC
GGCATTCCCG GCCGGGTGCT GATGGAAAAC GCGGGGCGGA GTGCCACCGG CTGGCTGCTT
GACACCATTC CCGACGCCCT TGAAAGACGC ATTGCCGTGA TCGCGGGCCG TGGCAACAAC
GGCGGCGACG GGTTTGTCAT GGCCCGGTAC CTGGCCCAGC GGGGGGCCGA GGTCACGGTA
TTTCTGCTGG CCGAAGAGAG CAAGGTGTCC GGCGACGCCA AAGCCAACCT GGACCTGCTT
TCCGCATTGA ATGTGCCGGT AATCTGCATT CCAGAAGAAA AAAGCTTTGC CAGAAAAAAA
ACGGCCCTCT CCCACCAGCA CCTGTTTATC GACGCCCTTC TGGGAACGGG CCTGAAATTT
GAAGTCAAGG GGCTGTTTGC AAAGGCCATT GATTTTATGA ACCGGTCAGG GCGGCCCGTC
TTTGCCGTGG ACATGCCCTC CGGCCTGGAT TCAGACACCG GGCAGCCCAG AGGCACCTGC
GTAAAAGCCG CGGCCACAGC CACTTTCGGT TTTGCCAAGC CAGGGCAGGT GCTGTTTCCC
GGCGCCGCAT TCACCGGAAA GCTGGGCGTG GTGGATATCG GCATTCCGCC ATTCGTGGCC
GATGAGGCCG ACTCCCGGCG ATGGTTGCTT ACACCGGCCA TGGCCGCCGG TTACCTTCGG
CCCCGCGAGC CGGACGCCCA CAAGGGAAGC GCCGGCCATC TGCTGGCAGT GGCCGGGTCC
GCCGGAAAAA CCGGGGCCGC GGCCATGGTC GGCATTGCCG CCATGCGGTC CGGCGCCGGC
CTTGTAACCC TGGCCGTGCC CGCCGGCATC AACGCGATTG TGGAGACCCT GGCAACAGAA
GTGATGACCC TGCCGGTAGG AGATACGGAT TGCCGAAAGT TTGACGAAAC ATGTATGGAT
TCGATCCTCG AACAAACAAC CGGCAAAAAG GCTCTGGCCA TAGGTCCTGG TATGGGAACC
GGGCAGGCTG CCAGAAACCT GCTGCGCGGT CTGATGGAAA AAAGCGACGC GCCCATGGTC
ATCGACGCCG ACGGTCTCAC CTGCCTGGCC GACGATCCGG ACTTGCTCTC TTTTAGCCGG
GACCGGGCGG TGTTCACCCC CCACCCCGGC GAAATGGCCC GGCTCTGCGG TATGACCGTC
GCCCAGGTGC AAAACGACAG GATCCGGTGC GCCCAGGACT TTGCCCGGAC CCACCACGTC
CACCTGGTTC TCAAGGGGGC GGGTACGGTC ATCGCCCATC CCGACGGCAC GGTGTTTGTC
AACCGCACCG GCAACCCGGG AATGGCCTCC GGCGGCATGG GAGACGTGCT GACCGGCGTC
ATTGCGGGCC TGTTCTGCCA GGGATATGAG ACAGGGATTG CGGCCCGGCT GGGCGTTTTT
CTTCACGGCC TGGCCGGAGA CATCGCGGGA GAAGAGACCG GGAAAACCGG ACTGCTGGCC
TCCGATGTGT CGTTCACCCT GCCCCGGGCC CTTCAAACCC TTGAAAGCAA GGACCATGAC
CGGTTTGTCG ACTGTTTTCC GACACAGATC AAGCTCGCCT GA
|
|---|
| Protein sequence | MYLVCADEMR QMDRTTIEAF GIPGRVLMEN AGRSATGWLL DTIPDALERR IAVIAGRGNN
GGDGFVMARY LAQRGAEVTV FLLAEESKVS GDAKANLDLL SALNVPVICI PEEKSFARKK
TALSHQHLFI DALLGTGLKF EVKGLFAKAI DFMNRSGRPV FAVDMPSGLD SDTGQPRGTC
VKAAATATFG FAKPGQVLFP GAAFTGKLGV VDIGIPPFVA DEADSRRWLL TPAMAAGYLR
PREPDAHKGS AGHLLAVAGS AGKTGAAAMV GIAAMRSGAG LVTLAVPAGI NAIVETLATE
VMTLPVGDTD CRKFDETCMD SILEQTTGKK ALAIGPGMGT GQAARNLLRG LMEKSDAPMV
IDADGLTCLA DDPDLLSFSR DRAVFTPHPG EMARLCGMTV AQVQNDRIRC AQDFARTHHV
HLVLKGAGTV IAHPDGTVFV NRTGNPGMAS GGMGDVLTGV IAGLFCQGYE TGIAARLGVF
LHGLAGDIAG EETGKTGLLA SDVSFTLPRA LQTLESKDHD RFVDCFPTQI KLA
|
|---|
| |