| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0739 |
|---|
| Symbol | |
|---|
| ID | 5693574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 861664 |
|---|
| End bp | 862950 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641263336 |
|---|
| Product | CRISPR-associated TIGR02710 family |
|---|
| Protein accession | YP_001528626 |
|---|
| Protein GI | 158520756 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02710] CRISPR-associated protein, TIGR02710 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAA ATCCACAAAA CAGGGATTTT TTGCAAATGA ACAAACCGAA CAGCGACGGG
GCCGCAGGGG CCATGATCGT TTCCGTGGGC GGCACGCCCG CGCCGGTGAT CGAGTCCATC
CGCCACTTTC GGCCGGTATT TGTCTCCTTT TTCGCCTCTC AAGAGACCCT GGACAAGGTA
ATGGAGATTA AAGGCGCGAT AAAGGCCGCC GGCCTTGAGT TGCAAAGCGA GGTCACCCTG
GCTGAAAACG TCAACGACCT GCTGCACTGC CACAAAAAGG CCGAGGAGGC CGTGGCCCGC
GTCATCGGCC GGGGCCACAG CCGGGACAGC GTCATTGTGG ATTACACCGG CGGCACCAAG
AACATGTCGG TTGCCCTGTC GCTTGCGGCC ATCACCCACG GGTTTTCTTT CTCCTATGTG
GGCGGAACCC GCCGCACCAG GGGGAACGTG GGCACCGTGG AAAACGGGGC CGAAAAGGTG
TTTCAAAGCG TCAACCCCTG GGATTTTCTG GCCGTGGAGG AACGAAAGAA AATCGCATTG
CTGTTTAACC GCCACCAGTT CAAGGCGGCC GGCCAGCTTT GCGCGGACCT GGCTGAAAAA
AACGTCAACC GGAGACTTGT GTACAAGAAA ATCGGGCTGA TGATCGAAGG CTTTCATGAA
TGGGATTTGC TGCGTCACAA AACCGCTGTT CGGCGTTTTG AAAAATGCGA AATAGACGAG
CTGCTGGATG ATGAGAATAA AGGCGTCCAG GCGTTCGCCA AAGCCGCAAA GGCACTGCTG
CCGTTCCTTG CGGATGCCGC CGGATGCGGA GAAAAACCAT GCCCGGCATA CATCCTGGAC
CTGTTTGCCA ATGCCGAACG CCGGTTTGAC GAAGGCAAAA CCGATGACGC CGTGCTCCGC
CTTTATCGCA TCGTGGAAAT GGCGGGCCAG CAGCGGCTGA TGGACACAAA CGGCATCGAC
ACGTCAAACG CGGCGCCGGA AAAACTGCCG GCCGGCCTGA AATCCATTTA TGAAGAAAAG
TACATGGATC CGGAAAGCAA AACCATCAAG ATTTCCATGG CAGCCGGGTA TAGCCTGCTA
AAAGAGATGG GCGACGACCT GGGTCTTCAG TTTTATGACC AAAAGGACTC GTTTCTAAAA
ATACAGGATT CCCGGAACCA CTCGTTTCTG GCCCACGGAT TCCGGTCGGC CAGGGAAGCG
GCGTACATGT CCCTGCGGGA TTTTATTGTG TCGTTAAACA TCTTTCAGGT CTCGGACGTG
CCCCGGTTTC CGGTCGTTGT TTTTTGA
|
|---|
| Protein sequence | MTANPQNRDF LQMNKPNSDG AAGAMIVSVG GTPAPVIESI RHFRPVFVSF FASQETLDKV
MEIKGAIKAA GLELQSEVTL AENVNDLLHC HKKAEEAVAR VIGRGHSRDS VIVDYTGGTK
NMSVALSLAA ITHGFSFSYV GGTRRTRGNV GTVENGAEKV FQSVNPWDFL AVEERKKIAL
LFNRHQFKAA GQLCADLAEK NVNRRLVYKK IGLMIEGFHE WDLLRHKTAV RRFEKCEIDE
LLDDENKGVQ AFAKAAKALL PFLADAAGCG EKPCPAYILD LFANAERRFD EGKTDDAVLR
LYRIVEMAGQ QRLMDTNGID TSNAAPEKLP AGLKSIYEEK YMDPESKTIK ISMAAGYSLL
KEMGDDLGLQ FYDQKDSFLK IQDSRNHSFL AHGFRSAREA AYMSLRDFIV SLNIFQVSDV
PRFPVVVF
|
|---|
| |