| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0735 |
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| Symbol | |
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| ID | 5693570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 854693 |
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| End bp | 855736 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641263332 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001528622 |
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| Protein GI | 158520752 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACG AGATATCCCT CTATCAGCGG TTGAGGGAAA ATGAGGAGAC CGCGAAAAAA
TTCTACGAGG TGGAAAAAAA GATCCTTTCC ATTCTGCGGT TCAAGGACCT TTTCGACGCC
CTGCTGGCCG AGATCAAGGG CCAGTTCAAC CTTCCCTACG TCTGGCTTTC CATCATTGAA
AACAGCGAGG CCCATCACCT GATTGAGTCG ATCGACGACA TGGACCCCGA GCTCAAGGCC
AGCATCAACA TCATCGACAG AAGCGCCTTT TTTGCGTTGA TCGGCCAGCA GACCGAACCA
ATCCTGGCCA ATGACGGGCT GAAGCCCTTT TTCAAGCTGC TGCCCGCGGA CCGGCACTAC
CTGGTCAAGT CCATGGCCAT TGCCCCTATC ATGATGGACG GTGAGATCGT GGGCAGCCTC
AACCAGGGGG ACGCGGCCCA GGACCGGTTT GAGCCGGGCA TGGACACCTC CCTGCTGGAA
CAGCTGGCCA CGAAGGTGTC ACTCTGCCTC TCCAACGTGG CGGCCCATGA AAAGCTCAAG
TTTCTGGCCT ACCATGACCC CCTCACCGGC CTGCTCAACC GCCGGGTGAT GGAGACGGCC
CTGGCCCGGG AGACGGCCCG GGCCGGCCGT TACAACCTGC CCCTGTCCGT TGTCTTTCTG
GACCTGGACT ACTTCAAGAA GGTCAACGAC ACCCACGGCC ATGAAACCGG GGACGCCCTG
CTCAAGCACC TGGCCGACCA GTTGGTGCAT CAATGCCGGG GCACCGACAT CGTGGCCCGG
TTTGCCGGAG ATGAGTTTGT GATCATTCTG CCGGAAACAG ACGCCGACCA TGCCACGGCC
CTGATGCACC GCATTCAGGA GCACCTGGCC GCATCCCCGC TGGTGTGCGG CGAGACCCCG
ATTCCCGTTG TCATCACCTT TGGCGTGGCC TCCACCATGG ATCCCGATCC TCCGAAAGAT
GACCCGGCCG CGCTCCTGAA AAAGGCTGAT GAACGGCTCT ACGAGAAAAA GGCGGCCCGC
CAAAACAAAG AGGGCCGCGC TTAA
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| Protein sequence | MNDEISLYQR LRENEETAKK FYEVEKKILS ILRFKDLFDA LLAEIKGQFN LPYVWLSIIE
NSEAHHLIES IDDMDPELKA SINIIDRSAF FALIGQQTEP ILANDGLKPF FKLLPADRHY
LVKSMAIAPI MMDGEIVGSL NQGDAAQDRF EPGMDTSLLE QLATKVSLCL SNVAAHEKLK
FLAYHDPLTG LLNRRVMETA LARETARAGR YNLPLSVVFL DLDYFKKVND THGHETGDAL
LKHLADQLVH QCRGTDIVAR FAGDEFVIIL PETDADHATA LMHRIQEHLA ASPLVCGETP
IPVVITFGVA STMDPDPPKD DPAALLKKAD ERLYEKKAAR QNKEGRA
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