Gene Dole_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0728 
Symbol 
ID5693563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp849655 
End bp850944 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content56% 
IMG OID641263325 
Productpreprotein translocase, SecY subunit 
Protein accessionYP_001528615 
Protein GI158520745 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0201] Preprotein translocase subunit SecY 
TIGRFAM ID[TIGR00967] preprotein translocase, SecY subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00054251 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCAC GCGGTTATCA GAACATATTC AAGATTCCGG AGCTCAAGCG ACGGATCCTG 
TTCACCCTGT CCATGCTTGC GGTTTACCGT ATCGGTGTCA TGATTCCCAC GCCGGGAATC
GACAGGGAGG CCCTGGCCCG CATTTTCGAG GCCCACAAGG GCGGCATGCT GGGTATGTTC
AACATGTTTT CCGGCGGCGC CCTGGAGCAG CTCTCGGTCT TTGCCCTGGG CATCATGCCC
TACATCAGCG CGGCCATTAT TCTGGAACTG CTCACCGTGG CCGTTCCTTA CCTGGAGCAG
CTGAAGAAAG AGGGCGAGCA GGGCCGGAAG AAGCTCACCC AGTACACCCG GTACGGTACC
GTGGTGCTGA GTATCATTCA GGGTTTTCTC ATGGCCGTGG GCATTGAGAA GATGGGCGCG
GTGATTGATC CGGGCTGGTC TTTTCGCCTG ATGACCGTCA TCACCCTGAC CGCGGGCACC
GCCTTTATCA TGTGGCTGGG CGAACAGATC ACGGAAAAGG GGATCGGCAA CGGGATTTCG
CTGATCATCT TTGCCGGCAT CGTGGCCCGT CTGCCGGCGG CTATTATTAA TACTTCCCGC
ATGATCTCCA CCGGAGACAT GGGCATCTTC GGGGTTCTCA TCCTTCTGGT GTTCATGGTG
GCGGTGGTGG GCGTCATTAT TTTCATGGAG CAGGGCCAGC GCCGGATTCC GATCCAGTAC
GCCAAGCGGG TGGTGGGACG GAGAATGTAT GGGGGCCAGA GTACCCACCT GCCCCTGAAG
ATCAACACGT CTGGCGTTAT TCCGCCTATT TTTGCGTCGT CGATCATGAT GTTCCCGGCC
ACCATGGCAG GATTTGTTGA TGTGCCGTTT GTTCAGGACA TGTCTGCGGT GCTGATGCCG
GGTCACTGGA TTTACAATGT TTTTTTCGTG GCCCTGATTT TTTTCTTCTG TTATTTTTAC
ACGGCGGTCA CCTTTAAACC GGATGACGTC GCGGAAAATA TGAAAAAACA GGGCGGCTAC
ATTCCAGGCA TTCGGCCGGG AAAACGGACC GCCGATTATA TCGACCGGGT GCTGACCCGG
ATCACCCTGG GCGGTGCCAC CTATGTAGCG GCAGTGTGCG TGCTGCCCAC CATATTGATT
TCGCAGTTCA ACGTGCCGTT CTATTTCGGC GGCACGGCGT TGCTGATTGT TGTCGGCGTG
GCCATCGACA CCACGGCCCA GATGGAGTCC CACATGATCC AGCGCAGTTA CGAAGGTTTT
CTGAAAAAGG GCATTCGGGG ACGCCGGTAG
 
Protein sequence
MFARGYQNIF KIPELKRRIL FTLSMLAVYR IGVMIPTPGI DREALARIFE AHKGGMLGMF 
NMFSGGALEQ LSVFALGIMP YISAAIILEL LTVAVPYLEQ LKKEGEQGRK KLTQYTRYGT
VVLSIIQGFL MAVGIEKMGA VIDPGWSFRL MTVITLTAGT AFIMWLGEQI TEKGIGNGIS
LIIFAGIVAR LPAAIINTSR MISTGDMGIF GVLILLVFMV AVVGVIIFME QGQRRIPIQY
AKRVVGRRMY GGQSTHLPLK INTSGVIPPI FASSIMMFPA TMAGFVDVPF VQDMSAVLMP
GHWIYNVFFV ALIFFFCYFY TAVTFKPDDV AENMKKQGGY IPGIRPGKRT ADYIDRVLTR
ITLGGATYVA AVCVLPTILI SQFNVPFYFG GTALLIVVGV AIDTTAQMES HMIQRSYEGF
LKKGIRGRR