Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0728 |
Symbol | |
ID | 5693563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 849655 |
End bp | 850944 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641263325 |
Product | preprotein translocase, SecY subunit |
Protein accession | YP_001528615 |
Protein GI | 158520745 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00054251 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGCAC GCGGTTATCA GAACATATTC AAGATTCCGG AGCTCAAGCG ACGGATCCTG TTCACCCTGT CCATGCTTGC GGTTTACCGT ATCGGTGTCA TGATTCCCAC GCCGGGAATC GACAGGGAGG CCCTGGCCCG CATTTTCGAG GCCCACAAGG GCGGCATGCT GGGTATGTTC AACATGTTTT CCGGCGGCGC CCTGGAGCAG CTCTCGGTCT TTGCCCTGGG CATCATGCCC TACATCAGCG CGGCCATTAT TCTGGAACTG CTCACCGTGG CCGTTCCTTA CCTGGAGCAG CTGAAGAAAG AGGGCGAGCA GGGCCGGAAG AAGCTCACCC AGTACACCCG GTACGGTACC GTGGTGCTGA GTATCATTCA GGGTTTTCTC ATGGCCGTGG GCATTGAGAA GATGGGCGCG GTGATTGATC CGGGCTGGTC TTTTCGCCTG ATGACCGTCA TCACCCTGAC CGCGGGCACC GCCTTTATCA TGTGGCTGGG CGAACAGATC ACGGAAAAGG GGATCGGCAA CGGGATTTCG CTGATCATCT TTGCCGGCAT CGTGGCCCGT CTGCCGGCGG CTATTATTAA TACTTCCCGC ATGATCTCCA CCGGAGACAT GGGCATCTTC GGGGTTCTCA TCCTTCTGGT GTTCATGGTG GCGGTGGTGG GCGTCATTAT TTTCATGGAG CAGGGCCAGC GCCGGATTCC GATCCAGTAC GCCAAGCGGG TGGTGGGACG GAGAATGTAT GGGGGCCAGA GTACCCACCT GCCCCTGAAG ATCAACACGT CTGGCGTTAT TCCGCCTATT TTTGCGTCGT CGATCATGAT GTTCCCGGCC ACCATGGCAG GATTTGTTGA TGTGCCGTTT GTTCAGGACA TGTCTGCGGT GCTGATGCCG GGTCACTGGA TTTACAATGT TTTTTTCGTG GCCCTGATTT TTTTCTTCTG TTATTTTTAC ACGGCGGTCA CCTTTAAACC GGATGACGTC GCGGAAAATA TGAAAAAACA GGGCGGCTAC ATTCCAGGCA TTCGGCCGGG AAAACGGACC GCCGATTATA TCGACCGGGT GCTGACCCGG ATCACCCTGG GCGGTGCCAC CTATGTAGCG GCAGTGTGCG TGCTGCCCAC CATATTGATT TCGCAGTTCA ACGTGCCGTT CTATTTCGGC GGCACGGCGT TGCTGATTGT TGTCGGCGTG GCCATCGACA CCACGGCCCA GATGGAGTCC CACATGATCC AGCGCAGTTA CGAAGGTTTT CTGAAAAAGG GCATTCGGGG ACGCCGGTAG
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Protein sequence | MFARGYQNIF KIPELKRRIL FTLSMLAVYR IGVMIPTPGI DREALARIFE AHKGGMLGMF NMFSGGALEQ LSVFALGIMP YISAAIILEL LTVAVPYLEQ LKKEGEQGRK KLTQYTRYGT VVLSIIQGFL MAVGIEKMGA VIDPGWSFRL MTVITLTAGT AFIMWLGEQI TEKGIGNGIS LIIFAGIVAR LPAAIINTSR MISTGDMGIF GVLILLVFMV AVVGVIIFME QGQRRIPIQY AKRVVGRRMY GGQSTHLPLK INTSGVIPPI FASSIMMFPA TMAGFVDVPF VQDMSAVLMP GHWIYNVFFV ALIFFFCYFY TAVTFKPDDV AENMKKQGGY IPGIRPGKRT ADYIDRVLTR ITLGGATYVA AVCVLPTILI SQFNVPFYFG GTALLIVVGV AIDTTAQMES HMIQRSYEGF LKKGIRGRR
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