Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0706 |
Symbol | |
ID | 5693541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 839167 |
End bp | 840360 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641263303 |
Product | elongation factor Tu |
Protein accession | YP_001528593 |
Protein GI | 158520723 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000240692 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGG CAAAGTTTGA GCGAAAAAAG CCGCATGTAA ACGTAGGTAC GATCGGCCAT ATCGACCACG GCAAGACGAC GCTGACCGCG GCGATCACGA AGCACTGCAG CCTGAAGGGC TGGGGCGAGT ACGTGGCGTT TGACAAGATC GACAAGGCGC CGGAAGAGCG CGAGCGCGGT ATCACCATTG CGACGGCCCA CGTGGAGTAC GAGTCGGATA CGCGACATTA CGCGCATGTG GACTGCCCGG GCCACGCGGA CTACATTAAG AACATGATCA CCGGCGCGGC CCAGATGGAC GGGGCGATCC TGGTGGTGGG CGCGGACGAC GGTCCCATGC CCCAGACCCG TGAGCACATT CTGCTGGCGC GTCAGGTGGG TGTGCCCAAG ATCGTGGTGT TTTTGAACAA GTGCGACATG GTGGACGACG AGGAGCTGAT CGAGCTGGTG GAGCTGGAGC TTCGGGAGCT TCTGGATAAG TATGATTTTC CGGGGGACGA CACCCCGATC ATTCGGGGCA GCGCGTTGAA GGCCCTGGAG AGCGACGATC CGGCCAGCGA CGAGGCCAAG TGCATATTTG AGCTGCTGGC GGCCCTGGAC TCTTACATTC CGGTTCCGGA GCGGGATACG GACAAGCCCT TCCTGATGCC CATTGAGGAC GTGTTCAGCA TTTCCGGCCG TGGCACGGTG GTGACGGGCC GTATCGAGCG CGGTATCGTG AAGGTGGGTG AAGAGATCGA GCTGGTGGGT ATTCGGGATA CGGCCAAGAC GGTGTGCACG GGCGTTGAGA TGTTCCGGAA GCTTCTGGAC GAAGGCCGCG CCGGCGATAA CGTGGGCCTG CTGCTGCGGG GCACCAAGCG CGACGAAGTG GAGCGGGGCC AGGTAGTGGC GGCGCCCAAG AGCATTACGC CGCACACCAA GTTCAAGGCC GAGGTATACA TTCTGAGCAA AGAGGAAGGC GGGCGTCATA CGCCGTTTTT CACCGGGTAC CGTCCGCAGT TTTATTTTCG TACAACGGAC GTGACGGGCA TTCTGAGCCT GCCGGAGAAC GTGGAGATGG TGATGCCGGG CGACAACGTG ACGATTACCG GTGAGCTGAT CACCCCCATC GCCATGGAAA AGGAACTGCG GTTTGCCGTC CGTGAGGGCG GGCGTACCGT GGGCGCCGGC GTTGTCAGTG AAATTATCGA ATAA
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Protein sequence | MAKAKFERKK PHVNVGTIGH IDHGKTTLTA AITKHCSLKG WGEYVAFDKI DKAPEERERG ITIATAHVEY ESDTRHYAHV DCPGHADYIK NMITGAAQMD GAILVVGADD GPMPQTREHI LLARQVGVPK IVVFLNKCDM VDDEELIELV ELELRELLDK YDFPGDDTPI IRGSALKALE SDDPASDEAK CIFELLAALD SYIPVPERDT DKPFLMPIED VFSISGRGTV VTGRIERGIV KVGEEIELVG IRDTAKTVCT GVEMFRKLLD EGRAGDNVGL LLRGTKRDEV ERGQVVAAPK SITPHTKFKA EVYILSKEEG GRHTPFFTGY RPQFYFRTTD VTGILSLPEN VEMVMPGDNV TITGELITPI AMEKELRFAV REGGRTVGAG VVSEIIE
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