| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0705 |
|---|
| Symbol | |
|---|
| ID | 5693540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 838608 |
|---|
| End bp | 839078 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641263302 |
|---|
| Product | 30S ribosomal protein S7 |
|---|
| Protein accession | YP_001528592 |
|---|
| Protein GI | 158520722 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000011534 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAGAA AAAGAGAAGT CCCGGTACGA CCGGTGTTGC CGGATGCACG GTACAACAGC
AAGCTGGTAT CCATGTTTAT TCACAAGCTG ATGCGCGACG GCAAGAAAAG CACGGCGGAG
TCCATACTCT ACAAGGCGTT TGACATTATC AACGAGAAGA CGGGCAAGGC GCCGCTGGAG
GTGTTTGAAG AGGCCCTGGC CAATGTCAAG CCCAAGCTTG AGGTCAAGTC CAGGCGCGTG
GGTGGTTCCA CCTATCAGGT GCCCACTGAG ATCCGGGAAG CCCGGCGGTT GGCCCTGGCC
ATCCGGTGGA TGATCGGCTA TGCCCGGAGC CGGGCCGAAA AGGGAATGGA CGTGAAACTG
GCCGGTGAGC TGATGGATGC GGCCGGGCAG CGGGGCGCTT CGGTCAAGAA ACGGGAAGAC
ACCCATAAGA TGGCGGAGGC GAACAAGGCT TTTGCCCACT ATCGGTGGTA G
|
|---|
| Protein sequence | MPRKREVPVR PVLPDARYNS KLVSMFIHKL MRDGKKSTAE SILYKAFDII NEKTGKAPLE
VFEEALANVK PKLEVKSRRV GGSTYQVPTE IREARRLALA IRWMIGYARS RAEKGMDVKL
AGELMDAAGQ RGASVKKRED THKMAEANKA FAHYRW
|
|---|
| |