| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0693 |
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| Symbol | |
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| ID | 5693523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 820073 |
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| End bp | 821689 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641263285 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit |
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| Protein accession | YP_001528580 |
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| Protein GI | 158520710 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.635421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCCT CTTTTTCTTT TCAGGAGATG TTTCCCACCG GGCCGGACAC CACCGCATAC
CGGCTGCTGA CCGCGGACCA TGTGGCAACC GCCGCCTTTG AAAAAACACC GGTGATCAAG
GTCGACCGGG CCGGTGTTGT GCTGCTGGCC GAAACCGCCT TTCGGGAAGT TTCCCATCTA
TTGCGGCCCT CCCATTTGAA ACAGACGGCA GCCATTTTAA CCGACCCGGA AAGCTCGGCC
AACGACCGCT ACGTGGCCCT GGAGATGATA AAAAATGCCG TTGTCGCTTC GGGTTACGTG
TTTCCCATCT GCCAGGACAC GGGCACGGCC ACAGTGATGG GCAAAAAGGG CCAGCAGGTG
TGGACCGGGT TTTCCGACGA GGCGGCCTTG AGCGAAGGCA TCTTCAACGC CTACCGGAAG
CTGAACCTGC GCTACTCCCA GGTGGCCCCC CTGACCCTGT ACGACGAGGC CAACACAAAA
ACCAACCTCC CGGCCCAGAT CGACCTTTAC GCCGTTGAAG GCGACGCCTA CCGGTTCCTT
TTTATCGCCA AGGGCGGGGG CTCGGCCAAC AAGACCTTTT TGTTTCAGAA GACAAAGGCT
GTTTTAAATT CCGAGGCCCT TCTGGCCTTT TTAAAGACCG AAATCGCCCA CTTGGGCACG
GCCGCCTGCC CGCCCTACCA CCTGGCCGTG GTCATCGGCG GCACATCCGC CGAGGCGGTC
TTAAAAACCG TCAAGCTGGC GTCCGCCGGC TACCTGGACA CCCTGCCGGA CAAGGGCAGC
CCCTCCGGCC ACGCCTTTCG GGACAGGGAT CTGGAAAAAG AACTTTTCAA AATTTCCCGG
GGTCTAAACC TGGGAGCCCA GTTCGGCGGC AAATACCTCT GCCACGACGT AAAGGTGATC
CGCATGCCCC GGCACGGGGC CTCCTGCCCA GTCGGCATGG GCTTAAGCTG CAGCGCGGAC
CGCAACCTCA AGGCAAAAAT CACCAAAGAG GGCATCTTTG TCGAGCAGTT GGAAACCGAT
CCGGCCCAAT ACCTTCCCAC ACCCCAGGCC AAAGAAAGCG ATGCCGTGCG CCTCGACCTG
GACCGGCCTC TTTCCGAGGT GAGAAACGAC CTCTCCCGCC TTGCCGTGGG CACCCGCCTG
CTGTTAAACG GCCCTGTCAT CGTGGCCAGA GACATTGCCC ACGCACGGGT CAAGGAGATG
CTTGACGCGG GCAAGCCCCT GCCGTCCTAC ATGACCGACT ACATGATTCT CTACGCCGGC
CCGGCCAAGA CCCCGGAAGG GTATCCCTCC GGCAGCCTGG GTCCCACCAC CTCGGCCCGC
ATGGACCCCT ATGTCACGGC TTTTCAACCC CACGGCGGCG CCCTGGTGAC CCTGGGCAAG
GGCAACCGGT CCCAGGCCGT GATCGACGCC TGCAAAACCA ACGGCGGCTT CTACCTTGGC
ACCATCGGCG GTGTTGCCGC CATTCTGGGA AAAGAATGCA TCACCGGCAT CGAGGTGATC
GACTTTCCGG AACTGGGCAT GGAGGCGGTA CAGCGCGTCA CGGTAAAGGA TTTCCCCGCC
TTTCTCATCA CCGATGACAA GGGAAACGAT TTTTTCAAAA ACCTGGCAGC AGGCTGA
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| Protein sequence | MEPSFSFQEM FPTGPDTTAY RLLTADHVAT AAFEKTPVIK VDRAGVVLLA ETAFREVSHL
LRPSHLKQTA AILTDPESSA NDRYVALEMI KNAVVASGYV FPICQDTGTA TVMGKKGQQV
WTGFSDEAAL SEGIFNAYRK LNLRYSQVAP LTLYDEANTK TNLPAQIDLY AVEGDAYRFL
FIAKGGGSAN KTFLFQKTKA VLNSEALLAF LKTEIAHLGT AACPPYHLAV VIGGTSAEAV
LKTVKLASAG YLDTLPDKGS PSGHAFRDRD LEKELFKISR GLNLGAQFGG KYLCHDVKVI
RMPRHGASCP VGMGLSCSAD RNLKAKITKE GIFVEQLETD PAQYLPTPQA KESDAVRLDL
DRPLSEVRND LSRLAVGTRL LLNGPVIVAR DIAHARVKEM LDAGKPLPSY MTDYMILYAG
PAKTPEGYPS GSLGPTTSAR MDPYVTAFQP HGGALVTLGK GNRSQAVIDA CKTNGGFYLG
TIGGVAAILG KECITGIEVI DFPELGMEAV QRVTVKDFPA FLITDDKGND FFKNLAAG
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